Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102015.1 | Gene: | Fbxl7 / 361907 | RGDID: | 1305813 | Length: | 491 | Species: | Rattus norvegicus |
Alignment Length: | 438 | Identity: | 105/438 - (23%) |
---|---|---|---|
Similarity: | 170/438 - (38%) | Gaps: | 104/438 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 GSEGSGNS-----------NSPSKRLRN----------------PLAAVTC--------NNQIDG 183
Fly 184 TASLNFQPSTSRLAQVRQAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILL 248
Fly 249 DIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRGVLVIRLAQTSIQ 313
Fly 314 EPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLENIELDDDICAEIAKNEA-- 376
Fly 377 --------LEAVNLTMASGLTSNSVRLMMESLTSLSSLN--------ISWTD---LSADAVTALV 422
Fly 423 THISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAIMKFK-MLEYLSV 486
Fly 487 SRCYLIP--ATKFIELKSMPSLTYLDIFGM--LSDTAMEVLEKQLPKM 530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 17/44 (39%) |
leucine-rich repeat | 302..327 | CDD:275381 | 7/24 (29%) | ||
AMN1 | 309..480 | CDD:187754 | 41/192 (21%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 4/22 (18%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 7/35 (20%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 7/24 (29%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 6/20 (30%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 8/24 (33%) | ||
Fbxl7 | NP_001102015.1 | F-box-like | 114..160 | CDD:289689 | 18/52 (35%) |
leucine-rich repeat | 129..151 | CDD:275381 | 9/21 (43%) | ||
leucine-rich repeat | 154..187 | CDD:275381 | 10/40 (25%) | ||
AMN1 | <185..366 | CDD:187754 | 45/198 (23%) | ||
leucine-rich repeat | 188..213 | CDD:275381 | 5/30 (17%) | ||
leucine-rich repeat | 214..234 | CDD:275381 | 6/27 (22%) | ||
leucine-rich repeat | 240..273 | CDD:275381 | 9/34 (26%) | ||
leucine-rich repeat | 274..299 | CDD:275381 | 4/25 (16%) | ||
AMN1 | 297..464 | CDD:187754 | 31/111 (28%) | ||
leucine-rich repeat | 300..325 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 326..351 | CDD:275381 | 7/24 (29%) | ||
leucine-rich repeat | 352..377 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 378..403 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 404..429 | CDD:275381 | 0/1 (0%) | ||
leucine-rich repeat | 430..453 | CDD:275381 | |||
leucine-rich repeat | 456..480 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166346676 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |