| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001260812.1 | Gene: | CG8272 / 35875 | FlyBaseID: | FBgn0033337 | Length: | 710 | Species: | Drosophila melanogaster |
| Alignment Length: | 577 | Identity: | 114/577 - (19%) |
|---|---|---|---|
| Similarity: | 190/577 - (32%) | Gaps: | 197/577 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 91 SNETTPCASVSRMAHQLQH--TQRLSLGSTGDI------TLDSPAVEDSLSMSRQSAEKLQILAQ 147
Fly 148 AKRSSL---------GS--EGSGNSNSPSKRLRNPLAAV----TCNNQIDGTASL----NFQPST 193
Fly 194 SRLAQ----------VRQAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSG----INYFERLSD 244
Fly 245 EILLDIFKWLPKKTLLRMATVCRRFN----------------------RCSRDETLWTRLDLGLR 287
Fly 288 TIRPGALEQIVRRGVLVI-----------------------RLAQTSIQEPAFAPYTEVFRTRLQ 329
Fly 330 YLDLSMASITRSSLLTLLSHCRQLKKISLENIELDDDICAEIAKNEALEAV----------NLTM 384
Fly 385 ASGLTS------NSVRLMM--------------------------ESLT-SLSSLNISWTDLSAD 416
Fly 417 AVT-------ALVTHISPNLIR-----------------LNIAGC-----------------RRV 440
Fly 441 LFDS-------HVATLQKRCPQLLELDLSDCNSLTPTVITAI-MKFKMLEYLSVSRC 489 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 12/66 (18%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 6/47 (13%) | ||
| AMN1 | 309..480 | CDD:187754 | 55/262 (21%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 5/23 (22%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 4/22 (18%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 11/67 (16%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 6/31 (19%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 10/66 (15%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 10/24 (42%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 4/9 (44%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | |||
| CG8272 | NP_001260812.1 | AMN1 | 269..440 | CDD:187754 | 37/188 (20%) |
| leucine-rich repeat | 270..295 | CDD:275381 | 5/25 (20%) | ||
| leucine-rich repeat | 296..319 | CDD:275381 | 5/27 (19%) | ||
| leucine-rich repeat | 322..346 | CDD:275381 | 5/23 (22%) | ||
| leucine-rich repeat | 347..399 | CDD:275381 | 9/55 (16%) | ||
| leucine-rich repeat | 400..426 | CDD:275381 | 7/32 (22%) | ||
| leucine-rich repeat | 427..535 | CDD:275381 | 21/107 (20%) | ||
| AMN1 | 515..>642 | CDD:187754 | 26/107 (24%) | ||
| leucine-rich repeat | 536..560 | CDD:275381 | 4/23 (17%) | ||
| leucine-rich repeat | 561..586 | CDD:275381 | 3/24 (13%) | ||
| leucine-rich repeat | 587..612 | CDD:275381 | 10/24 (42%) | ||
| leucine-rich repeat | 613..638 | CDD:275381 | 4/9 (44%) | ||
| leucine-rich repeat | 639..663 | CDD:275381 | |||
| F-box-like | 12..>44 | CDD:289689 | |||
| leucine-rich repeat | 129..166 | CDD:275381 | 8/36 (22%) | ||
| leucine-rich repeat | 167..192 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 193..244 | CDD:275381 | 4/51 (8%) | ||
| C2 | <231..274 | CDD:301316 | 5/42 (12%) | ||
| leucine-rich repeat | 246..269 | CDD:275381 | 4/22 (18%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45457980 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||