Protein Alignment Skp2 and jet

DIOPT Version :10

• Sequence 1: NP_730815.2
• Gene: Skp2 / 40548
• FlyBaseID: FBgn0037236
• Length: 559
• Species: Drosophila melanogaster
• Sequence 2: NP_608880.2
• Gene: jet / 33705
• FlyBaseID: FBgn0031652
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 336
• Identity: 71/336 - (21%)
• Similarity: 129/336 - (38%)
• Gaps: 84/336 - (25%)

  Fly   226 PAMSAHINSGINYFERLSDEILL-DIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTI 289
            |.::|.|.:..:.|:...|::|: .:..:|..|.|..:.  |     |||....:..
  Fly    29 PLVTASIAAPRSLFDVCWDDVLIPQVAVYLSLKDLFNLR--C-----CSRTAQRFVE-------- 78

  Fly   290 RPGALEQIVRRGVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMAS-ITRSSLLTLLSHCRQL 353
              .|||   :|..|.:....|...:.||.......: ||:.|.|:... :|...||.||::
  Fly    79 --AALE---KRQELHLSGNNTKNIDVAFRVLARCCQ-RLEVLHLACCRWLTDELLLPLLAN---- 133

  Fly   354 KKISLENIELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNIS---WTDLSA 415
                               ..:.|.||||.....:|:.|::.::.....|..|.:|   |  |:.
  Fly   134 -------------------NKKRLWAVNLNECVNITALSLQPIIVECKELRVLKLSKCQW--LTT 177

  Fly   416 DAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRC--------PQLLELDLSDCNSLTPTVI 472
            .||.||..|.| .|:..:|:.|         ..:.:||        .:|..|.|::..|:|..|:
  Fly   178 GAVDALTLHQS-KLVEFDISYC---------GAIGERCLIIFFRKLNKLTVLSLANTPSVTDQVL 232

  Fly   473 TAIMKF-KMLEYLSVSRCYLIP------------ATKFIELKSMPSLTYLDIFGMLSDTAMEVLE 524
            ..|..: :.||:::|..|..|.            ..:.:.::..|.:|.|.:..:.....  .::
  Fly   233 IQIGNYCRELEHINVIGCAAISDYGVHALTVHCLRLRTLLIRRCPRVTELSLAPLRQRRL--YID 295

  Fly   525 KQLPKMGINKF 535
            :..|.:|:|.:
  Fly   296 RPQPDVGLNAY 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Skp2	NP_730815.2	F-box_DmSKP2-like	239..281	CDD:438920	10/42 (24%)
		leucine-rich repeat	302..327	CDD:275381	4/24 (17%)
		AMN1	309..480	CDD:187754	42/183 (23%)
		leucine-rich repeat	328..352	CDD:275381	8/24 (33%)
		leucine-rich repeat	353..376	CDD:275381	0/22 (0%)
		leucine-rich repeat	377..402	CDD:275381	7/24 (29%)
		leucine-rich repeat	403..428	CDD:275381	11/27 (41%)
		leucine-rich repeat	429..455	CDD:275381	5/33 (15%)
		leucine-rich repeat	456..480	CDD:275381	7/24 (29%)
		leucine-rich repeat	481..500	CDD:275381	5/30 (17%)
		leucine-rich repeat	506..529	CDD:275381	2/22 (9%)
jet	NP_608880.2	F-box_FBXL15	41..84	CDD:438898	13/62 (21%)
		leucine-rich repeat	85..110	CDD:275381	4/25 (16%)
		AMN1	96..>261	CDD:187754	46/200 (23%)
		leucine-rich repeat	111..137	CDD:275381	8/48 (17%)
		leucine-rich repeat	138..163	CDD:275381	7/24 (29%)
		leucine-rich repeat	164..189	CDD:275381	11/27 (41%)
		leucine-rich repeat	190..215	CDD:275381	5/33 (15%)
		leucine-rich repeat	216..241	CDD:275381	7/24 (29%)
		leucine-rich repeat	242..267	CDD:275381	5/24 (21%)
		leucine-rich repeat	268..290	CDD:275381	3/21 (14%)