| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006230338.1 | Gene: | Fbxl19 / 308999 | RGDID: | 1310989 | Length: | 739 | Species: | Rattus norvegicus |
| Alignment Length: | 534 | Identity: | 121/534 - (22%) |
|---|---|---|---|
| Similarity: | 186/534 - (34%) | Gaps: | 148/534 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 RKHRGSENMENLCPVTRKRSTNKNHVSVVGALVSTTKSSHYEHPSSPSALTFEALE--------E 60
Fly 61 MGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHTQRL--SLGSTGDITL 123
Fly 124 DSPAVEDSLSMSRQSAEKLQILAQAKRSSLGSEGSGNSNSPSKRLR----NPLAAVTCNNQIDGT 184
Fly 185 ASLNFQPSTSRLAQVRQAKKPSTTNITTRIVAADSFFVFRTPAMSAH-----INSGINYFERLSD 244
Fly 245 EIL-----LDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLR-TIRPGALEQIVRRGVL 303
Fly 304 VIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN-------- 360
Fly 361 --------IELDDDICAEIAKNEALEAVNL---------TMASG--------------LTSNSVR 394
Fly 395 LMMESLTSLSSLNISWT----DLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQ 455
Fly 456 LLELDLSDCNSLTP 469 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/49 (31%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 1/24 (4%) | ||
| AMN1 | 309..480 | CDD:187754 | 50/204 (25%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 7/23 (30%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 6/38 (16%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 9/47 (19%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 8/28 (29%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 11/25 (44%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 7/14 (50%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | |||
| leucine-rich repeat | 506..529 | CDD:275381 | |||
| Fbxl19 | XP_006230338.1 | zf-CXXC | <95..122 | CDD:251032 | |
| PHD_FXL19 | 132..193 | CDD:277115 | |||
| F-box-like | 469..512 | CDD:289689 | 14/42 (33%) | ||
| AMN1 | 511..710 | CDD:187754 | 55/226 (24%) | ||
| leucine-rich repeat | 531..554 | CDD:275381 | 7/22 (32%) | ||
| leucine-rich repeat | 555..578 | CDD:275381 | 2/22 (9%) | ||
| leucine-rich repeat | 616..643 | CDD:275381 | 5/26 (19%) | ||
| leucine-rich repeat | 644..670 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 674..698 | CDD:275381 | 11/25 (44%) | ||
| leucine-rich repeat | 699..723 | CDD:275381 | 7/14 (50%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166346681 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.840 | |||||