Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036008913.1 | Gene: | Fbxl19 / 233902 | MGIID: | 3039600 | Length: | 696 | Species: | Mus musculus |
Alignment Length: | 530 | Identity: | 123/530 - (23%) |
---|---|---|---|
Similarity: | 187/530 - (35%) | Gaps: | 140/530 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 RKHRGSENMENLCPVTRKRSTNKNHVSVVGALVSTTKSSHYEHPSSPSALTFEALE--------E 60
Fly 61 MGIGMLDSEESSSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHTQRL--SLGSTGDITL 123
Fly 124 DSPAVEDSLSMSRQSAEKLQILAQAKRSSLGSEGSGNSNSPSKRLRNPLAAVTCNNQIDGTASLN 188
Fly 189 FQPSTSRLAQVRQAKKPSTTNITTRIVAADSFFVFRTPAMSAH-----INSGINYFERLSDEIL- 247
Fly 248 ----LDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLR-TIRPGALEQIVRRGVLVIRL 307
Fly 308 AQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSLLTLLSHCRQLKKISLEN------------ 360
Fly 361 ----IELDDDICAEIAKNEALEAVNL---------TMASG--------------LTSNSVRLMME 398
Fly 399 SLTSLSSLNISWT----DLSADAVTALVTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLEL 459
Fly 460 DLSDCNSLTP 469 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/49 (31%) |
leucine-rich repeat | 302..327 | CDD:275381 | 1/24 (4%) | ||
AMN1 | 309..480 | CDD:187754 | 50/204 (25%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 6/38 (16%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 9/47 (19%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 8/28 (29%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 11/25 (44%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 7/14 (50%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | |||
leucine-rich repeat | 506..529 | CDD:275381 | |||
Fbxl19 | XP_036008913.1 | zf-CXXC | <52..79 | CDD:366873 | |
PHD_FXL19 | 89..150 | CDD:277115 | |||
F-box-like | 426..467 | CDD:403981 | 13/40 (33%) | ||
AMN1 | 468..667 | CDD:187754 | 55/226 (24%) | ||
leucine-rich repeat | 488..511 | CDD:275381 | 7/22 (32%) | ||
leucine-rich repeat | 512..535 | CDD:275381 | 2/22 (9%) | ||
leucine-rich repeat | 573..600 | CDD:275381 | 5/26 (19%) | ||
leucine-rich repeat | 601..627 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 631..655 | CDD:275381 | 11/25 (44%) | ||
leucine-rich repeat | 656..680 | CDD:275381 | 7/14 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167843175 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |