DRSC/TRiP Functional Genomics Resources

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Protein Alignment Skp2 and FBXL7

DIOPT Version :10

Sequence 1:NP_730815.2 Gene:Skp2 / 40548 FlyBaseID:FBgn0037236 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_036436.1 Gene:FBXL7 / 23194 HGNCID:13604 Length:491 Species:Homo sapiens


Alignment Length:439 Identity:105/439 - (23%)
Similarity:172/439 - (39%) Gaps:106/439 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 GSEGSGNS-----------NSPSKRLRN----------------PLAAVTC--------NNQIDG 183
            ||||.|:|           ::|:|..:|                |..|:.|        |.:...
Human    10 GSEGKGSSSISSDVSSSTDHTPTKAQKNVATSEDSDLSMRTLSTPSPALICPPNLPGFQNGRGSS 74

  Fly   184 TASLNFQPSTSRLAQVRQAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEILL 248
            |:|.:....|     |.....|..|.:|..::...|    |.....|.|       :||.|..::
Human    75 TSSSSITGET-----VAMVHSPPPTRLTHPLIRLAS----RPQKEQASI-------DRLPDHSMV 123

  Fly   249 DIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIVRRGVLVIRLAQTSIQ 313
            .||.:||...|.|.|.||||:...:.|..||..:.|...||.   :::.::  ||..||.|.   
Human   124 QIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRLTGETIN---VDRALK--VLTRRLCQD--- 180

  Fly   314 EPAFAPYTEVFRTRLQYLDLS-MASITRSSLLTLLSHCRQLKKISLENIELDDDICAEIAKNEA- 376
                   |......|:.:.:| ...:|...|.|:...|.:|:::.:..       |..|: ||| 
Human   181 -------TPNVCLMLETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSG-------CYNIS-NEAV 230

  Fly   377 ---------LEAVNLTMASGLTSNSVRLMMESLTSLSSLN--------ISWTD---LSADAVTAL 421
                     ||.::::..|.:|  .:.|..|:...||.|:        :..||   |..:.:..:
Human   231 FDVVSLCPNLEHLDVSGCSKVT--CISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTI 293

  Fly   422 VTHISPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAIMKFK-MLEYLS 485
            ..|.: .|..|.:..|.| |.|..:..|...|..:.||.:|||..::...:..|.|.: .|.|||
Human   294 AAHCT-QLTHLYLRRCVR-LTDEGLRYLVIYCASIKELSVSDCRFVSDFGLREIAKLESRLRYLS 356

  Fly   486 VSRCYLIP--ATKFIELKSMPSLTYLDIFGM--LSDTAMEVLEKQLPKM 530
            ::.|..:.  ..::: .|....|.||:..|.  ::|..:|.|.|...|:
Human   357 IAHCGRVTDVGIRYV-AKYCSKLRYLNARGCEGITDHGVEYLAKNCTKL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Skp2NP_730815.2 F-box_DmSKP2-like 239..281 CDD:438920 17/41 (41%)
leucine-rich repeat 302..327 CDD:275381 6/24 (25%)
AMN1 309..480 CDD:187754 42/193 (22%)
leucine-rich repeat 328..352 CDD:275381 6/24 (25%)
leucine-rich repeat 353..376 CDD:275381 4/22 (18%)
leucine-rich repeat 377..402 CDD:275381 6/24 (25%)
leucine-rich repeat 403..428 CDD:275381 7/35 (20%)
leucine-rich repeat 429..455 CDD:275381 8/25 (32%)
leucine-rich repeat 456..480 CDD:275381 7/24 (29%)
leucine-rich repeat 481..500 CDD:275381 5/20 (25%)
leucine-rich repeat 506..529 CDD:275381 8/24 (33%)
FBXL7NP_036436.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79 15/68 (22%)
F-box_FBXL7 114..157 CDD:438892 18/49 (37%)
leucine-rich repeat 129..151 CDD:275381 9/21 (43%)
leucine-rich repeat 154..187 CDD:275381 10/47 (21%)
LRR 1 170..195 7/36 (19%)
AMN1 <185..366 CDD:187754 45/192 (23%)
leucine-rich repeat 188..213 CDD:275381 6/24 (25%)
LRR 2 196..221 5/24 (21%)
leucine-rich repeat 214..234 CDD:275381 6/27 (22%)
LRR 3 222..247 7/25 (28%)
leucine-rich repeat 240..273 CDD:275381 9/34 (26%)
LRR 4 253..281 5/27 (19%)
leucine-rich repeat 274..299 CDD:275381 4/25 (16%)
LRR 5 282..307 4/25 (16%)
AMN1 297..464 CDD:187754 30/111 (27%)
leucine-rich repeat 300..325 CDD:275381 8/25 (32%)
LRR 6 308..333 8/25 (32%)
leucine-rich repeat 326..351 CDD:275381 7/24 (29%)
LRR 7 334..359 7/24 (29%)
leucine-rich repeat 352..377 CDD:275381 6/25 (24%)
LRR 8 360..385 5/25 (20%)
leucine-rich repeat 378..403 CDD:275381 8/24 (33%)
LRR 9 386..411 5/19 (26%)
leucine-rich repeat 404..429 CDD:275381 0/1 (0%)
LRR 10 412..437
leucine-rich repeat 430..453 CDD:275381
LRR 11 438..463
leucine-rich repeat 456..480 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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