| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001028484.2 | Gene: | Fbxl18 / 231863 | MGIID: | 2444450 | Length: | 707 | Species: | Mus musculus |
| Alignment Length: | 649 | Identity: | 112/649 - (17%) |
|---|---|---|---|
| Similarity: | 205/649 - (31%) | Gaps: | 206/649 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 72 SSSALSAIALAVSATSDDNSNETTPCASVSRMAHQLQHTQRLSLGSTGDITLDSPAVEDSLSMSR 136
Fly 137 -------------------QSAEKL----QILAQAKRSSL--GSEGSGNSNSPSKRLRNPLAAVT 176
Fly 177 CNNQIDGTASLNFQPSTSRLAQVRQAKKPSTTN----------ITTRIVAADSFFVFRTPAMSAH 231
Fly 232 INSGINYFERLSDEILLDIFK----WLPKKTLLRMATVCR----RFNRCS-RDETLWTRLDLGLR 287
Fly 288 TIRPGALEQIVRRGVL-------VIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRS---- 341
Fly 342 ----SLLTLLSHCRQL-------------------------------KKISLENIELDDDICAEI 371
Fly 372 AKN---------------EALEAVNLTMASGLTSNSVRLMMESLTSLS-SLNISWTDLSADAVTA 420
Fly 421 LVTHI-------------------------SPNLIRLNIAGCRRVLFDSHVATLQKRCPQLLEL- 459
Fly 460 --------------DLSDCNSLTPTVIT---------AIMKFKMLEYLSVSRCYLIPATKFIELK 501
Fly 502 SM------------PSLTYLDIFGMLSDTAMEVLEKQLPKMGINKFIHSSVSRPTVGTRRTSIW 553 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 13/53 (25%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 4/31 (13%) | ||
| AMN1 | 309..480 | CDD:187754 | 44/274 (16%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 10/31 (32%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 4/68 (6%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 6/24 (25%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 5/50 (10%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 7/25 (28%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 8/47 (17%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 3/18 (17%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 5/22 (23%) | ||
| Fbxl18 | NP_001028484.2 | F-box-like | 22..64 | CDD:289689 | |
| leucine-rich repeat | 85..109 | CDD:275381 | 3/11 (27%) | ||
| leucine-rich repeat | 110..131 | CDD:275381 | 2/20 (10%) | ||
| leucine-rich repeat | 308..330 | CDD:275381 | 7/21 (33%) | ||
| leucine-rich repeat | 331..373 | CDD:275381 | 7/44 (16%) | ||
| leucine-rich repeat | 374..403 | CDD:275381 | 9/28 (32%) | ||
| leucine-rich repeat | 404..473 | CDD:275381 | 5/68 (7%) | ||
| leucine-rich repeat | 522..548 | CDD:275381 | 1/25 (4%) | ||
| leucine-rich repeat | 549..578 | CDD:275381 | 8/30 (27%) | ||
| leucine-rich repeat | 579..604 | CDD:275381 | 4/24 (17%) | ||
| leucine-rich repeat | 605..629 | CDD:275381 | 4/24 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167843105 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR16134 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.030 | |||||