| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001359968.1 | Gene: | Y9C9A.13 / 189418 | WormBaseID: | WBGene00021180 | Length: | 635 | Species: | Caenorhabditis elegans |
| Alignment Length: | 283 | Identity: | 66/283 - (23%) |
|---|---|---|---|
| Similarity: | 111/283 - (39%) | Gaps: | 82/283 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 311 SIQEPAFAPYTEVFRTRL-----QYLDLSMASITRSSLLTLLSHCRQLKKISLENIELDDDICAE 370
Fly 371 IAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNIS--------WTDLS-ADAVTALVTH-- 424
Fly 425 ISPNLIRLNIAGCRRVL-------------FDSHV--------ATLQKRC---PQLLELDLSD-- 463
Fly 464 ------CNSLTPTVITAIMKFKMLEYLSVSRCYLIPA-----TKFIELK-----------SMPSL 506
Fly 507 TYLDIFGMLSDTAMEVLEKQLPK 529 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box_DmSKP2-like | 239..281 | CDD:438920 | |
| leucine-rich repeat | 302..327 | CDD:275381 | 5/15 (33%) | ||
| AMN1 | 309..480 | CDD:187754 | 51/216 (24%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 7/28 (25%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 6/22 (27%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 8/24 (33%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 5/35 (14%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 11/49 (22%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 8/31 (26%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 6/23 (26%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 7/22 (32%) | ||
| Y9C9A.13 | NP_001359968.1 | LRR | <122..328 | CDD:443914 | 35/150 (23%) |
| leucine-rich repeat | 123..148 | CDD:275381 | 7/24 (29%) | ||
| leucine-rich repeat | 149..173 | CDD:275381 | 4/23 (17%) | ||
| leucine-rich repeat | 174..195 | CDD:275381 | 6/20 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||