| Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_496512.2 | Gene: | F44E5.2 / 185735 | WormBaseID: | WBGene00009689 | Length: | 489 | Species: | Caenorhabditis elegans |
| Alignment Length: | 244 | Identity: | 53/244 - (21%) |
|---|---|---|---|
| Similarity: | 94/244 - (38%) | Gaps: | 72/244 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 354 KKISLENIELDDDICAEIA----------KNEALEAVNLTMASGLTS------------------ 390
Fly 391 ----NSVRLMMESLTSLSSLNISWTDLSADAVTA-----LVTHISPNLIRLNIAGCRRVLFDSHV 446
Fly 447 ATLQKRCPQLLELDLSDCN-----------SLTPTV-----------ITAIMKFKMLEYLSVSR- 488
Fly 489 -----CYLIPATKFIELKS-MPSLTYLDIFGMLSD-TAMEVLEKQLPKM 530 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Skp2 | NP_730815.2 | F-box_DmSKP2-like | 239..281 | CDD:438920 | |
| leucine-rich repeat | 302..327 | CDD:275381 | |||
| AMN1 | 309..480 | CDD:187754 | 36/184 (20%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | |||
| leucine-rich repeat | 353..376 | CDD:275381 | 10/31 (32%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 7/46 (15%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 4/29 (14%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 5/25 (20%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 8/45 (18%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 7/24 (29%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 5/23 (22%) | ||
| F44E5.2 | NP_496512.2 | LRR | 22..>278 | CDD:443914 | 53/244 (22%) |
| leucine-rich repeat | 123..148 | CDD:275380 | 2/24 (8%) | ||
| leucine-rich repeat | 149..173 | CDD:275380 | 5/25 (20%) | ||
| leucine-rich repeat | 174..195 | CDD:275380 | 6/20 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||