Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001317764.1 | Gene: | gadr-4 / 173745 | WormBaseID: | WBGene00021053 | Length: | 797 | Species: | Caenorhabditis elegans |
Alignment Length: | 315 | Identity: | 66/315 - (20%) |
---|---|---|---|
Similarity: | 119/315 - (37%) | Gaps: | 94/315 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 232 INSGINYFERLSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQ 296
Fly 297 IVRRGVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMASITRSSL----LTLLSHCRQLKKIS 357
Fly 358 LENIELDDDICAEIAKNEALEAVNLTMASGLTSNSVRLMMESLTSLSSLNISWTDLSADAVTALV 422
Fly 423 THISPNLIRLNIAG--CRRVLFDSHVATLQKRCPQLLELDLSDCNSLTPTVITAIMKFKMLEYLS 485
Fly 486 VS------RCYLIPATKFIEL-KSMPSLTYLDIFGMLSDTAMEVLEKQL---PKM 530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 4/44 (9%) |
leucine-rich repeat | 302..327 | CDD:275381 | 4/24 (17%) | ||
AMN1 | 309..480 | CDD:187754 | 37/176 (21%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 1/22 (5%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 3/23 (13%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | 7/25 (28%) | ||
gadr-4 | NP_001317764.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160162735 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |