Protein Alignment Skp2 and FipoQ

DIOPT Version :10

• Sequence 1: NP_730815.2
• Gene: Skp2 / 40548
• FlyBaseID: FBgn0037236
• Length: 559
• Species: Drosophila melanogaster
• Sequence 2: XP_061499628.1
• Gene: FipoQ / 1274334
• VectorBaseID: AGAMI1_006261
• Length: 519
• Species: Anopheles gambiae
• Alignment Length: 357
• Identity: 91/357 - (25%)
• Similarity: 153/357 - (42%)
• Gaps: 73/357 - (20%)

  Fly   214 IVAADSFF--VFRTPAMSAHINSGINYFERLSDEILLDIFKWLPKKTLLRMATVCRRFNRCSRDE 276
            ||.:|||.  .||...|....:|.....|:|.|:::|.||.:|....:.||||||||:...:.:.
Mosquito    11 IVHSDSFSSGSFRRSRMLFFGSSDGTSIEKLPDKVILHIFSYLSHLEICRMATVCRRWRTIAYNT 75

  Fly   277 TLWTRLDL-----GLRTIRPGALEQIVRRGVLVIRLAQTSIQEPAFAPYTEVFRTRLQYLDLSMA 336
            .||..:.|     ||..   |:||.:::  ::.:|          |.|       .|:|::|.:.
Mosquito    76 QLWKNVSLRPEVSGLHV---GSLESLLQ--LISVR----------FGP-------SLRYIELPIE 118

  Fly   337 SITRSSLLTLLSHCRQLKKISLE---NIELDDDICAEIAKNEALEAVNLTMASGLT-----SNSV 393
            .||.:.|..|.|.|..|..:.|:   .::|.|     .::.:|..|....|...|:     ...:
Mosquito   119 LITHTVLHELSSKCPNLTHMLLDFSTAMQLHD-----FSEMQAFPAKLRYMCICLSEVIFMEGFM 178

  Fly   394 RLMMESLTSLSSLNISWT-----DLSADAVTALVTH----ISPNLIRLNIAGCRRVLFDSHVATL 449
            |.:...:..|..|::..|     :...:....:..|    .:|||..:|:.|. ..:.|||:...
Mosquito   179 RKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVINLYGI-NFIDDSHIDAF 242

  Fly   450 QKRCPQLLELDLSDCNSLTPTVITAIM-KFKMLEYLSVSRCYLIPATKFIELKS---------MP 504
            ...|.||..|.::.||.:|.:.:.|:: :.|.|      :|.|:..|   .|||         ..
Mosquito   243 SSNCIQLECLAVNYCNKVTGSTLKALLARSKQL------KCLLMNGT---SLKSEYVMQAEWDKC 298

  Fly   505 SLTYLDIFGMLSDTAMEVLEKQLPKMGINKFI 536
            |:..|||.|  :|.:.|.|...|.::...:|:
Mosquito   299 SVQELDISG--TDLSTECLIDLLTRIPTLRFL 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Skp2	NP_730815.2	F-box_DmSKP2-like	239..281	CDD:438920	17/41 (41%)
		leucine-rich repeat	302..327	CDD:275381	3/24 (13%)
		AMN1	309..480	CDD:187754	40/188 (21%)
		leucine-rich repeat	328..352	CDD:275381	9/23 (39%)
		leucine-rich repeat	353..376	CDD:275381	4/25 (16%)
		leucine-rich repeat	377..402	CDD:275381	4/29 (14%)
		leucine-rich repeat	403..428	CDD:275381	4/33 (12%)
		leucine-rich repeat	429..455	CDD:275381	7/25 (28%)
		leucine-rich repeat	456..480	CDD:275381	6/24 (25%)
		leucine-rich repeat	481..500	CDD:275381	4/18 (22%)
		leucine-rich repeat	506..529	CDD:275381	8/22 (36%)
FipoQ	XP_061499628.1	None