Sequence 1: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001091661.1 | Gene: | si:ch211-214j8.12 / 100000539 | ZFINID: | ZDB-GENE-060526-102 | Length: | 627 | Species: | Danio rerio |
Alignment Length: | 547 | Identity: | 111/547 - (20%) |
---|---|---|---|
Similarity: | 193/547 - (35%) | Gaps: | 171/547 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 CPVTRKRSTNK-NHVSVVGALVSTTKSSHYEHPSSPSALTFEALEEMGIGMLDSEESSSSALSAI 79
Fly 80 ALAVSATSDDNSNETTPCASVSRMAHQLQHTQRLSLGSTGDITLDSPAVEDSLSMSRQ------- 137
Fly 138 -SAEKLQILAQ--AKRSSLGSEGSGNSNSPSKRLRNPLAAVTCNNQIDGTASLNFQPSTSRLAQV 199
Fly 200 RQAKKPSTTNITTRIVAADSFFVFRTPAMSAHINSGINYFERLSDEI---LLDIFKWLPKKTLLR 261
Fly 262 MATVCRRFNRCSRDETLWTRLDLGLRTIRPGALEQIV-----RRGVLVIR--------LAQTSIQ 313
Fly 314 EPAFAPYTEVFRTRLQ-----YLDLSMASIT---RSSLLTLLSHCRQLKKISLE----NIELDDD 366
Fly 367 ICAEIAKNEALEAVNLTMASGLTSNSVRL-MMESLTSLSSLN-------ISWTDLSADAVTALVT 423
Fly 424 HISPNLIRLNIAG--CR-----RVLFDSHVATLQK------RCPQLLELDLSDCNSLTPTVITAI 475
Fly 476 MKFKMLEYLSVSRCYLIPATKFIELKS 502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 9/47 (19%) |
leucine-rich repeat | 302..327 | CDD:275381 | 6/32 (19%) | ||
AMN1 | 309..480 | CDD:187754 | 47/203 (23%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 9/31 (29%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 7/26 (27%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 5/25 (20%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 9/31 (29%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 6/38 (16%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 4/18 (22%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | |||
si:ch211-214j8.12 | NP_001091661.1 | AMN1 | 122..>201 | CDD:187754 | 5/22 (23%) |
leucine-rich repeat | 130..155 | CDD:275381 | |||
leucine-rich repeat | 156..180 | CDD:275381 | 1/1 (100%) | ||
leucine-rich repeat | 181..215 | CDD:275381 | 6/38 (16%) | ||
leucine-rich repeat | 216..243 | CDD:275381 | 8/50 (16%) | ||
leucine-rich repeat | 314..368 | CDD:275381 | 16/83 (19%) | ||
leucine-rich repeat | 403..427 | CDD:275381 | 7/26 (27%) | ||
leucine-rich repeat | 428..453 | CDD:275381 | 7/24 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170587992 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |