DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1103 and CLRN1

DIOPT Version :9

Sequence 1:NP_001036660.1 Gene:CG1103 / 40547 FlyBaseID:FBgn0037235 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001182723.1 Gene:CLRN1 / 7401 HGNCID:12605 Length:245 Species:Homo sapiens


Alignment Length:250 Identity:49/250 - (19%)
Similarity:84/250 - (33%) Gaps:95/250 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MSLHTRALVF--STFFGSCLAIGLLLVSMTTNHWVRATPRRK------NSSDAK-----GEFNFG 57
            |....:.::|  :..|....|:| ::.::.|..|::||...|      |:|..:     ||..:|
Human     1 MPSQQKKIIFCMAGVFSFACALG-VVTALGTPLWIKATVLCKTGALLVNASGQELDKFMGEMQYG 64

  Fly    58 LFFGNYHLNPGFGVR----------------TNSVDVYTFVRTENDDTSFWLWLLTTLGTGF--- 103
            ||.|......|.|.|                :..|:|..|        |..|.:||.:||.|   
Human    65 LFHGEGVRQCGLGARPFRFSFFPDLLKAIPVSIHVNVILF--------SAILIVLTMVGTAFFMY 121

  Fly   104 --------------ALLACAVAAIAAVLKSASAAKKGG---TMMLLLTSNI-----------CAA 140
                          .|...:..::|..|.:.....:|.   .:|:|..|.:           ...
Human   122 NAFGKPFETLHGPLGLYLLSFISVALWLPATRHQAQGSCGCLVMILFASEVKIHHLSEKIANYKE 186

  Fly   141 GAQI---------VAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNGL--AYLGYSF 184
            |..:         .:|  |:: |:.:|:|            :.|||  ...|:.|
Human   187 GTYVYKTQSEKYTTSF--WVI-FFCFFVH------------FLNGLLIRLAGFQF 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1103NP_001036660.1 Claudin_2 22..203 CDD:258170 45/231 (19%)
CLRN1NP_001182723.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151927
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1188976at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR31548
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.040

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