Protein Alignment CG1103 and Clrn1

DIOPT Version :9

• Sequence 1: NP_001036660.1
• Gene: CG1103 / 40547
• FlyBaseID: FBgn0037235
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_695211.2
• Gene: Clrn1 / 261738
• RGDID: 628779
• Length: 232
• Species: Rattus norvegicus
• Alignment Length: 226
• Identity: 50/226 - (22%)
• Similarity: 71/226 - (31%)
• Gaps: 82/226 - (36%)

  Fly    13 LVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRK------NSSDAK-----GEFNFGLFFGNYHLN 66
            |.|....|...|:|       |..||:||...|      |:|..:     ||..:|||.|.....
  Rat    16 LSFLCALGVVTAVG-------TPLWVKATILCKTGALLVNASGKELDKFMGEMQYGLFHGEGVRQ 73

  Fly    67 PGFGVR----------------TNSVDVYTFVRTENDDTSFWLWLLTTLGTGFAL-------LAC 108
            .|.|.|                :..|::..|        |..|.:||.:||.|.:       ...
  Rat    74 CGLGARPFRFSFFPDLVQAIPVSIHVNIILF--------SMILVVLTMVGTAFFMYNAFGKPFET 130

  Fly   109 AVAAIAAVLKSASAAKKGGTMMLLLTS--NICAAGAQIVAFVA----------------WLVQFY 155
            ....:...|.|..:...|..:|:|..|  .|.....:|..|..                |:| |.
  Rat   131 LHGPLGLYLVSFISGSCGCLVMILFASEVKIHRLSEKIANFKEGTYAYKTQNENYTTSFWVV-FI 194

  Fly   156 QYFIHNVLLTEQQQQHWYSNGL--AYLGYSF 184
            .:|:|            :.|||  ...|:.|
  Rat   195 CFFVH------------FLNGLLIRLAGFQF 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1103	NP_001036660.1	Claudin_2	22..203	CDD:258170	47/217 (22%)
Clrn1	NP_695211.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166345460
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1188976at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR31548
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.040