DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1103 and clrn1

DIOPT Version :10

Sequence 1:NP_649456.3 Gene:CG1103 / 40547 FlyBaseID:FBgn0037235 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_002937147.3 Gene:clrn1 / 100497170 XenbaseID:XB-GENE-6044813 Length:232 Species:Xenopus tropicalis


Alignment Length:235 Identity:44/235 - (18%)
Similarity:77/235 - (32%) Gaps:84/235 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRK------NSSDAK-----GEFNFGLFFGNYHLN 66
            |.|:.......|:|..|       ||:.|...|      |:::.:     ||..:|||||.....
 Frog    16 LSFACALSIAAALGKQL-------WVKGTILCKTAALLVNATEGELHQFVGEIQYGLFFGQRVKQ 73

  Fly    67 PGFGVRTNS----------------VDVYTFVRTENDDTSFWLWLLTTLGTGFALLACAVAAIAA 115
            .|.|.|..:                |.|..|        |..|.:...:||||.:.        .
 Frog    74 CGLGGRPTTFSFFPDLLNVIPASMHVSVIIF--------STALIVFALVGTGFFMF--------N 122

  Fly   116 VLKSASAAKKGGTMMLLLTSNICAAGAQIVAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNGLAYL 180
            ...:......|...:.|.....|:.|..::                :|.:.:.:.|..|..:|  
 Frog   123 AFGNPFETLHGPVGLYLWCFVSCSCGCLVL----------------ILFSSEVKMHHLSEKIA-- 169

  Fly   181 GY----------------SFYLVVVSTVVVLLNIAILLYA 204
            .|                |:::::|.|:|.::|:.::..|
 Frog   170 NYKEGSFVFKTHSEQFQTSYWIILVCTLVHIVNVFLIRVA 209

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