DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1103 and clrn2

DIOPT Version :9

Sequence 1:NP_001036660.1 Gene:CG1103 / 40547 FlyBaseID:FBgn0037235 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_017946490.1 Gene:clrn2 / 100491228 XenbaseID:XB-GENE-6045463 Length:232 Species:Xenopus tropicalis


Alignment Length:220 Identity:52/220 - (23%)
Similarity:83/220 - (37%) Gaps:42/220 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KMSLHTRALVFSTFFGSCLAIGLLLVSMTTNHWVRATPRRK------NSSDAK-----GEFNFGL 58
            |..|.:.|.|.|  |.|.|   |::|:|.|..|:..|...:      |:||.:     |:..:||
 Frog     6 KKILFSLASVVS--FVSFL---LIVVAMGTQKWMTGTILCQTGVDLVNASDPELVKFIGDIYYGL 65

  Fly    59 FFGNYHLNPGFGVRTNSVDVYT-FVRTENDDTSFWLWLLTTLGTGFALLACAVAAIAAVLKSASA 122
            |.|......|.|.|.....::. .|:..|.....::.|.......|||::... .|..|:|....
 Frog    66 FQGGKVRQCGLGKRRFKFSIFPHMVKKLNTSLHVFIILFLCSAIAFALISFGF-CIYNVIKVPYR 129

  Fly   123 AKKG-----------GTMMLLLTSNICAAGAQIVAFVAWLVQFYQYFIHNVLLTEQQQQHWYSNG 176
            :.||           |..::...|:..|| .|:.:....:..|.:.....|:|.|..:.      
 Frog   130 SIKGPAGICLWNLIAGLFIVFAVSSFIAA-VQLHSLTERIANFRENVFRIVILEEHYED------ 187

  Fly   177 LAYLGYSFYLVVVSTVVVLLNIAIL 201
                  ||:|.|.|......||.::
 Frog   188 ------SFWLCVASGATHAFNILLM 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1103NP_001036660.1 Claudin_2 22..203 CDD:258170 45/203 (22%)
clrn2XP_017946490.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1188976at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR31548
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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