DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Tc2n

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001076445.1 Gene:Tc2n / 74413 MGIID:1921663 Length:489 Species:Mus musculus


Alignment Length:528 Identity:102/528 - (19%)
Similarity:195/528 - (36%) Gaps:138/528 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 QRVTVSRD--PLAIAERGKVGIPSSHS-------ECSSN--------DSMEV------------- 166
            |:.:|.||  ..|.:.:..:|||...|       .|:.:        |..||             
Mouse    21 QKFSVDRDFKASASSSQNTIGIPPLTSVLVKPQVGCNEDYLLSKLPCDGKEVQFVVPRFKLSYIQ 85

  Fly   167 ----SVDSHTGVLTGLSKAT---------TTVPH-PATAFRNPCGEHRAKTQALRYQHRVNVAAP 217
                .:.||...|.|.::|:         ::..| |:....|||         ..|||     ..
Mouse    86 PRTQGIPSHLDELEGSARASFGDQKTELCSSFYHGPSYDVYNPC---------YMYQH-----FS 136

  Fly   218 PKLDKERDNVLVVPMVNAYSINNNNNSITTSNNHPSSNNNDDEPLFDTSDLRSIKSDDLLVGVDQ 282
            |.|.:.     .:|......:..:...:.||....||..:.......||..|.|:..|....|..
Mouse   137 PDLSRR-----FLPHCETKQLYGSVCDLRTSKLPGSSGLSKSMLDLTTSSQRFIQRHDSFSSVPS 196

  Fly   283 KEPA------------------VQRGPIELELSLLYDAPMRKMTVHVMQAKNLP-PLGSGQTTHT 328
            ...:                  .:|....|.:.|.|::...::.:.|:|.:::. |...|.|...
Mouse   197 SSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKLFYNSSAEQIWITVLQCRDISWPSSYGDTPTI 261

  Fly   329 QVRMLMLPSKKQKLKTKIRSGENP-QYMESFLLHRVNPEDVNNMGLRVRLYGCERLR-------- 384
            .::.::..||....|:..:.|.|. ::||:|:             ..::|...:.:|        
Mouse   262 SIKGILTLSKPVHFKSSAKEGSNAIEFMETFV-------------FAIKLQNLQAVRLAFKIQTQ 313

  Fly   385 --KERLIGEAYVSFATVDL-ELETNLWLPLEPRNTSSGLGSTSDLLSLARSESAGSTSSMQHGGV 446
              |::.|||..:|..|:.. |:|.:|.: :.|..           :|:.:               
Mouse   314 TPKKKTIGECSLSLRTLSTQEMEYSLEI-IAPSK-----------ISVCQ--------------- 351

  Fly   447 SELLLGLSYNGVTGRLSVEIIKGSQFRSLSLNKAPDTYVKMVMVSSIGQEISRAKTSIRRGQPNP 511
            :||.||..:..|..|:.::|::.....|.|.......:||:.|.|| |:.|.:.||.:.:.....
Mouse   352 AELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVGMFSS-GELIYKKKTRLLKASSGR 415

  Fly   512 L-FKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSEEVAHWADVCEMPKGE 575
            : :.||..|.:...: .::..:|.:|::..:::...||...:..:|:..|.|..|.:....|: :
Mouse   416 VKWGETMIFPLIQTE-KEIVFLIKLYSRSSVRRKHFVGQLWISEDSNNIEAVNQWKETITNPE-K 478

  Fly   576 MLARWHVL 583
            ::.:||.|
Mouse   479 VVIKWHKL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 27/134 (20%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 33/139 (24%)
Tc2nNP_001076445.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..214 2/24 (8%)
C2A_Tac2-N 239..341 CDD:176066 24/114 (21%)
C2B_Tac2-N 352..486 CDD:176074 32/136 (24%)
Nuclear localization signal 446..448 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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