DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Syt5

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_062223.1 Gene:Syt5 / 54309 RGDID:3806 Length:386 Species:Rattus norvegicus


Alignment Length:293 Identity:74/293 - (25%)
Similarity:140/293 - (47%) Gaps:33/293 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 LELSLLYDAPMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLKTKI-RSGENPQYMES 357
            |:.||.||....::.|.::||:.|..|..|.::...|.:.:||.|:::.:||: |...||.:.|:
  Rat   112 LQYSLDYDFQTGQLLVGILQAEGLAALDLGGSSDPYVSVYLLPDKRRRHETKVHRQTLNPHFGET 176

  Fly   358 FLLHRVNPEDVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNLW--LPLEPRNTSSGL 420
            |.. :|...::....|.:.:|..:|..:...|||..|..::|:|......|  |.:.|:.....|
  Rat   177 FAF-KVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVNLGRPVQAWRELQVAPKEEQEKL 240

  Fly   421 GSTSDLLSLARSESAGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSLSLNKAPDTYV 485
            |                          ::...|.|....|:|:|.:::....:.:.:....|.||
  Rat   241 G--------------------------DICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYV 279

  Fly   486 KMVMVSSIGQEISRAKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWF 550
            |:.::.. |:::.:.||:|::...||.:.|.|:|:|...|:..|.:.::|.....:.|||.:|..
  Rat   280 KVHLLQG-GKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQKVQVELTVLDYDKLGKNEAIGRV 343

  Fly   551 SLGLNSSGSEEVAHWADVCEMPKGEMLARWHVL 583
            ::| .:.|...:.||||:...|: ..:|:||.|
  Rat   344 AVG-TAVGGAGLRHWADMLANPR-RPIAQWHSL 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 34/121 (28%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 37/138 (27%)
Syt5NP_062223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Syt1_2_N 6..76 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 108..230 CDD:176031 33/118 (28%)
C2B_Synaptotagmin-1 240..374 CDD:176047 38/162 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.