DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Sytalpha

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster


Alignment Length:522 Identity:118/522 - (22%)
Similarity:193/522 - (36%) Gaps:116/522 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AVKCVQKITRKRRYENTSSDSEEDILRRLRWHQQHQL---GEK----------PGGYGLGISQAN 113
            ||......|..:||             ||.|.:|:.|   .||          .|..|..:...|
  Fly    38 AVGAALYTTCSKRY-------------RLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVN 89

  Fly   114 PLTAQSFNYHQAGASADLQRVTVSRDPLAIAERGKVGIPSSHSECSSNDSMEVSVDSHTGVLTGL 178
            .:....::...||..:.....:...||       ...:|:|   .:|..:::..|.:        
  Fly    90 EVPRGKYSSGNAGNLSPTSLKSEDNDP-------AFWVPAS---VTSTAAIQQQVSN-------- 136

  Fly   179 SKATTTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDKERDNVLVVPMVNAYSINNNNN 243
               ||....|.|   :|.|.  .|:..|.|....:|   |....::..||.:             
  Fly   137 ---TTEESAPPT---SPTGS--LKSNTLSYCSTTSV---PIARSDKHVVLAM------------- 177

  Fly   244 SITTSNNHP------SSNNNDDEPLFDTSDLRSIKSDDLLVGVDQKEPAVQRGPIELELSLLYDA 302
                   ||      |.|...|....|.:..||......:..|...|   .||  .|.:||.||.
  Fly   178 -------HPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNE---VRG--NLHVSLGYDP 230

  Fly   303 PMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLKTKIRSGE-NPQYMESFLLHRVNPE 366
            ....:.|.:::|:||.|.....|.....::.:||.||...:|:|.... ||.:.|.|:. .|...
  Fly   231 VGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVF-EVTAG 294

  Fly   367 DVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNLWLPLEPRNTSSGLGSTSDLLSLAR 431
            .::...:.:.||..:...:...||.:.:..|.:||..:..||.||                    
  Fly   295 VIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPL-------------------- 339

  Fly   432 SESAGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSL-SLNKAPDTYVKMVMVSSIGQ 495
              |:.|...|: ..:.::::.|:|.....||.|.:||....|.: ....:.|.|||:.::...|:
  Fly   340 --SSASAQDMK-VDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGK 401

  Fly   496 EISRAKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSE 560
            :|.:.||.::||..||::.|..||.||...|.:..|..:|.....:..:|::|...:|    .|.
  Fly   402 KIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG----NSP 462

  Fly   561 EV 562
            ||
  Fly   463 EV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 33/122 (27%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 34/118 (29%)
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 35/147 (24%)
C2B_Synaptotagmin 352..488 CDD:175975 34/117 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468169
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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