DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Pla2g4f

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001019316.1 Gene:Pla2g4f / 271844 MGIID:2685493 Length:855 Species:Mus musculus


Alignment Length:579 Identity:110/579 - (18%)
Similarity:188/579 - (32%) Gaps:178/579 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KITRKRRYENTSSDSEEDILRRLRWHQQHQLGEKPGGYGLGISQANPLTAQSFNYHQAGASADLQ 132
            |:.|.|..::|...|:.|...|| |.....:  .|......::.::|...::|.|...||..::.
Mouse    49 KVLRARNIQHTDKLSKADCYVRL-WLPTASV--SPSQTRTVVNSSDPEWNETFPYQIHGAVKNVL 110

  Fly   133 RVTVSRDPLAIAERG----------KVGIPSSHSECSSNDSMEVSVDSHTGVLTGLSKATTTVPH 187
            .:.:..:.:..::..          ::|.|.:.:.....|..|:.|:      ..|.|:.|....
Mouse   111 ELALYDEDVLDSDNVFSILFDTSTLQLGQPCTKNFTRQQDPKELEVE------FTLEKSQTPASE 169

  Fly   188 PAT---AFRNPCGEHRAKTQALRYQHRVNVAAPPKLDK--ERDNVLVVPMVNAYSINNNNNSITT 247
            ..|   ...:||         ||.|..|.......|.:  .|...|.||  .||           
Mouse   170 VVTNGVLVAHPC---------LRIQGTVTGDKTASLGELGSRQIQLAVP--GAY----------- 212

  Fly   248 SNNHPSSNNNDDEPLFDTSD----------LRSIKSDDLLVGVDQKEPAVQRGP---IELELS-- 297
                     ...:||..||:          :..:.|..|.:.:.::......||   :|.:.|  
Mouse   213 ---------EKPQPLQPTSEPGLPVNFTFHVNPVLSPKLHIKLQEQLQVFHSGPSDELEAQTSKM 268

  Fly   298 -----LLYDAPMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLKTKIRSG-------- 349
                 ||...|:.:      :...|..|..||    ||.:.|...........:|.|        
Mouse   269 DKASILLSSLPLNE------ELTKLVDLEEGQ----QVSLRMKADMSSSGDLDLRLGFDLCDGEQ 323

  Fly   350 ---ENPQYMESFLLHRVNPEDVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNLWLPL 411
               :..:.:.|..|.||       |||...|: |:::....::|                     
Mouse   324 EFLDKRKQVASKALQRV-------MGLSEALH-CDQVPVVAVLG--------------------- 359

  Fly   412 EPRNTSSGLGSTSDLLSLARSESAGSTSSMQHGGVSELLLGLSYNGVTG-RLSVEIIKGSQFRSL 475
                  || |.|..:.||     .||.:.:|..|:.:.:..||  ||:| ...:..:......|.
Mouse   360 ------SG-GGTRAMTSL-----YGSLAGLQELGLLDAVTYLS--GVSGSSWCISTLYRDPSWSQ 410

  Fly   476 SLNKAPDTYV-KMVMVSSIG-------QEISRAKTSIRRGQPNPLFKETFAFQVALF-------- 524
            ...:.|..|. :.|..|.||       :..||.|.:......:..|.:.:...:..|        
Mouse   411 KALQGPIKYASERVCSSKIGMLSPKQFEYYSREKRAWESRGHSMSFTDLWGLIIEYFLNQEENPA 475

  Fly   525 QLNDVTLMIS-------VYAKRHMKKNEMVGWFSLGLNSSGSEEVAHWADVCEMPKGEM 576
            :|:|....:|       :||..::.|           |.|| ::.|.|   ||....|:
Mouse   476 KLSDQQETVSQGQNPYPIYASINVHK-----------NISG-DDFAEW---CEFTPYEV 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 25/142 (18%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 31/155 (20%)
Pla2g4fNP_001019316.1 C2_cPLA2 46..162 CDD:176001 21/121 (17%)
Patatin_and_cPLA2 300..848 CDD:299702 54/278 (19%)
PLAc 307..796 CDD:214474 53/271 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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