DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Syt3

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_061995.1 Gene:Syt3 / 25731 RGDID:3805 Length:588 Species:Rattus norvegicus


Alignment Length:524 Identity:126/524 - (24%)
Similarity:195/524 - (37%) Gaps:112/524 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 KPGGYGLGISQANPLTAQSFNYHQAG-ASADLQRVTVSRDPLAIAERGKVG-----IPSSHSECS 159
            :|||.| |.....|......:|.:|. ||.....|..|:....:...|..|     :|.|.....
  Rat   148 EPGGLG-GSEPPEPSYLDMDSYPEAAVASVVAAGVKPSQTSPELPSEGGTGSGLLLLPPSGGGLP 211

  Fly   160 SNDSMEVSVDSHTGVLTGLSKAT--TTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDK 222
                   |..||..| |.|:..|  ..:|.|.|                  |..:...|.|. .:
  Rat   212 -------SAQSHQQV-TSLAPTTRYPALPRPLT------------------QQTLTTQADPS-SE 249

  Fly   223 ERDNVLVVPMVNAYSINNNNNSITTSNNHPSSNNNDDEPLFDTSDLRSIKSD--------DLLVG 279
            ||...|.:|:                   |.....       ...:..||.:        ....|
  Rat   250 ERPPALPLPL-------------------PGGEEK-------AKLIGQIKPELYQGTGPGGRRTG 288

  Fly   280 VDQKEPAVQRGPIELELSLLYDAPMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLKT 344
            ....|.....|.|...|..||.:.  ::.|.::||.:||...|...:...|::.:||.:|:|.:|
  Rat   289 GGSGEAGAPCGRISFALRYLYGSD--QLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQT 351

  Fly   345 KI-RSGENPQYMESFLLHRVNPEDVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLEL----- 403
            |: |...||.:.|:|.. .|...::....|...:|..:|..:..|||:..:...   |||     
  Rat   352 KVHRKTLNPIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNL---LELAEQPP 412

  Fly   404 ETNLWLPLEPRNTSSGLGSTSDLLSLARSESAGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIK 468
            :..||     |:...|....:||                    .||...|.|....|.|:|.|||
  Rat   413 DRPLW-----RDILEGGSEKADL--------------------GELNFSLCYLPTAGLLTVTIIK 452

  Fly   469 GSQFRSLSLNKAPDTYVKMVMVSSIGQEISRAKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMI 533
            .|..:::.|....|.|||..::|. |:.:.:.||||::...||.:.|...|.||...:.:|.|.|
  Rat   453 ASNLKAMDLTGFSDPYVKASLISE-GRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI 516

  Fly   534 SVYAKRHMKKNEMVGWFSLGLNSSGSEEVAHWADVCEMPKGEMLARWHVLVDSXFEQLGQSSGRS 598
            :|.....:..||::|...:|..::......|||::...|: :.:..||.||:   |:...|..:.
  Rat   517 AVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPR-KPVEHWHQLVE---EKTLSSFTKG 577

  Fly   599 GKAL 602
            ||.|
  Rat   578 GKGL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 34/127 (27%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 42/137 (31%)
Syt3NP_061995.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..161 5/13 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..222 10/46 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..257 5/19 (26%)
C2A_Synaptotagmin-1-5-6-9-10 297..422 CDD:176031 36/135 (27%)
C2B_Synaptotagmin-3-5-6-9-10 431..565 CDD:176048 42/135 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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