DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Syt4

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_033334.2 Gene:Syt4 / 20983 MGIID:101759 Length:425 Species:Mus musculus


Alignment Length:606 Identity:121/606 - (19%)
Similarity:218/606 - (35%) Gaps:207/606 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IVTSASGLDSTPTLGTIEVTTLLGAF--FGVLVLLLLLFLFISRKCC------------FHYRHA 52
            |.||....|        |:.|::|.|  || ||..:.||.:|   ||            :.:.|.
Mouse     4 ITTSRVEFD--------EIPTVVGIFSAFG-LVFTVSLFAWI---CCQRRSAKSNKTPPYKFVHV 56

  Fly    53 INCCDERHLAVKCVQKITRKRRYENTSSDSEEDI-----LRRLRWHQQHQLGEKPGGYGLGISQA 112
            :...|      ...:.::.|:::   ..|.:.::     |..|..|...:..:..|.:    .:|
Mouse    57 LKGVD------IYPENLSSKKKF---GGDDKSEVKGKAALPNLSLHLDLEKRDLNGNF----PKA 108

  Fly   113 NPLTAQSFNYHQAGASADLQRVTVSRDPLAIAERGKVGIPSSHSECSSNDSMEVSVDSHTGVLTG 177
            ||         :||:|:||:.||                                          
Mouse   109 NP---------KAGSSSDLENVT------------------------------------------ 122

  Fly   178 LSKATTTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDKERDNVLVVPMVNAYSINNNN 242
                                                    |||..|.:.                
Mouse   123 ----------------------------------------PKLFTETEK---------------- 131

  Fly   243 NSITTSNNHPSSNNNDDEPLFDTSDLRSIKSDDLLVGVDQKEPAVQRGPIELELSLLYDAPMRKM 307
                 ..|.|                .|:||...|...:::|   :.|  .|.|||.|:...:..
Mouse   132 -----EANSP----------------ESLKSSTSLTSEEKQE---KLG--TLFLSLEYNFEKKAF 170

  Fly   308 TVHVMQAKNLPPLG-SGQTTHTQVRMLMLPSKKQKLKTKI-RSGENPQYMESFLLHRVNPEDVNN 370
            .|::.:|:.||.:. ...|:...::|.:||.||.::||:: |...:|.:.|:|..:.:....:..
Mouse   171 VVNIKEAQGLPAMDEQSMTSDPYIKMTILPEKKHRVKTRVLRKTLDPVFDETFTFYGIPYPHIQE 235

  Fly   371 MGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNLWLPLEPRNTSSG-LGSTSDLLSLARSES 434
            :.|...:...:|..::.:|||..:..:.::|               |.| :..|.:::.....:|
Mouse   236 LSLHFTVLSFDRFSRDDVIGEVLIPLSGIEL---------------SDGKMLMTREIIKRNAKKS 285

  Fly   435 AGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSLSLNKAPDTYVKMVMVSSIGQEISR 499
            :|.         .|||:.|.|...|..|:|.::|........::...|.||| |.:....:.||:
Mouse   286 SGR---------GELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVK-VNLYHAKKRISK 340

  Fly   500 AKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSEEVAH 564
            .||.:::..||.:|.|.|.|.:....|.::::...|.......:||::|...||..:.||.. .|
Mouse   341 KKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGG-GH 404

  Fly   565 WADVCEMPKGEMLARWHVLVD 585
            |.::|:.|: ..:|:||:|.|
Mouse   405 WKEICDFPR-RQIAKWHMLCD 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 27/123 (22%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 40/137 (29%)
Syt4NP_033334.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 7/56 (13%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 31/142 (22%)
C2B_Synaptotagmin-4 288..423 CDD:176049 40/146 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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