DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and Syt3

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001107588.1 Gene:Syt3 / 20981 MGIID:99665 Length:587 Species:Mus musculus


Alignment Length:533 Identity:128/533 - (24%)
Similarity:198/533 - (37%) Gaps:131/533 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 KPGGYGLGISQANPLTAQSFNYHQAG-ASADLQRVTVSRDPLAIAERGKVG-----IPSSHSECS 159
            :|||.| |.....|......:|.:|. ||.....|..|:....:...|..|     :|.|.....
Mouse   148 EPGGLG-GSEPPEPSYLDMDSYPEAAVASVVAAGVKPSQTSPELPSEGGTGSGLLLLPPSGGGLP 211

  Fly   160 SNDSMEVSVDSHTGVLTGLSKAT--TTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDK 222
                   |..||..| |.|:..|  ..:|.|.|                  |..:...|.|..: 
Mouse   212 -------SAQSHQQV-TSLAPTTRYPALPRPLT------------------QQTLTTQADPSTE- 249

  Fly   223 ERDNVLVVPMVNAYSINNNNNSITTSNNHPSSNNNDDEPLFDTSDLRSIKSDDLLVGVDQKE--- 284
            ||...|.:|:                   |.......                 |:|..:.|   
Mouse   250 ERPPALPLPL-------------------PGGEEKAK-----------------LIGQIKPELYQ 278

  Fly   285 ---PAVQR-----------GPIELELSLLYDAPMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLML 335
               |..:|           |.|...|..||.:.  ::.|.::||.:||...|...:...|::.:|
Mouse   279 GTGPGGRRGGGSGEAGAPCGRISFALRYLYGSD--QLVVRILQALDLPAKDSNGFSDPYVKIYLL 341

  Fly   336 PSKKQKLKTKI-RSGENPQYMESFLLHRVNPEDVNNMGLRVRLYGCERLRKERLIGEAYVSFATV 399
            |.:|:|.:||: |...||.:.|:|.. .|...::....|...:|..:|..:..|||:..:...  
Mouse   342 PDRKKKFQTKVHRKTLNPIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNL-- 403

  Fly   400 DLEL-----ETNLWLPLEPRNTSSGLGSTSDLLSLARSESAGSTSSMQHGGVSELLLGLSYNGVT 459
             |||     :..||     |:...|....:||                    .||...|.|....
Mouse   404 -LELAEQPPDRPLW-----RDILEGGSEKADL--------------------GELNFSLCYLPTA 442

  Fly   460 GRLSVEIIKGSQFRSLSLNKAPDTYVKMVMVSSIGQEISRAKTSIRRGQPNPLFKETFAFQVALF 524
            |||:|.|||.|..:::.|....|.|||..::|. |:.:.:.||||::...||.:.|...|.||..
Mouse   443 GRLTVTIIKASNLKAMDLTGFSDPYVKASLISE-GRRLKKRKTSIKKNTLNPTYNEALVFDVAPE 506

  Fly   525 QLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSEEVAHWADVCEMPKGEMLARWHVLVDSXFE 589
            .:.:|.|.|:|.....:..||::|...:|..::......|||::...|: :.:..||.||:   |
Mouse   507 SVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPR-KPVEHWHQLVE---E 567

  Fly   590 QLGQSSGRSGKAL 602
            :...|..:.||.|
Mouse   568 KTLSSFTKGGKGL 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 34/127 (27%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 43/137 (31%)
Syt3NP_001107588.1 Cysteine motif. /evidence=ECO:0000269|PubMed:10531343 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..258 21/101 (21%)
C2A_Synaptotagmin-1-5-6-9-10 297..421 CDD:176031 36/134 (27%)
C2B_Synaptotagmin-3-5-6-9-10 430..564 CDD:176048 43/135 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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