DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and snt-2

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_497261.2 Gene:snt-2 / 185680 WormBaseID:WBGene00004922 Length:369 Species:Caenorhabditis elegans


Alignment Length:378 Identity:87/378 - (23%)
Similarity:164/378 - (43%) Gaps:71/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 VPMVNAY-------SINN------NNNSIT---TSNNHPSSNNNDDEPLFDTSDLRSIKSDDLLV 278
            ||..|.|       .|.|      ::..||   |::::....||...||..:..|  ||      
 Worm    26 VPTSNGYHPRPKHVDIGNGAVPILSSKPITVQPTNSDYYEPVNNGTLPLSSSGAL--IK------ 82

  Fly   279 GVDQKEPAVQRGPIELELSLLYDAPMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLK 343
                     |.|.|...:.  ||....|::|.::.|.:||.:.....:...|::.:||.:|||.:
 Worm    83 ---------QYGNIHFRVE--YDFEQSKLSVTIVSASDLPAMDRNGMSDPYVKVYVLPERKQKFE 136

  Fly   344 TK-IRSGENPQYMESFLLHRVNPEDVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNL 407
            |: ||:..||.|.|:|.. .:...::::..|.:.:|..:||.|:..:|:..|...::|..:.|::
 Worm   137 TRIIRNTLNPTYNETFQF-SIPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPLESIDFGITTDI 200

  Fly   408 WLPLE-PRNTSSGLGSTSDLLSLARSESAGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQ 471
            ..||: |.....                       :...:.::.....|...||.:::.|::...
 Worm   201 ERPLQKPEKDDE-----------------------KECRLGDICFSTRYRPATGTVTLTIMEARN 242

  Fly   472 FRSLSLNKAPDTYVKMVMVSSIGQE-ISRAKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISV 535
            .:.:.:..:.|.|||:.:  ..|:: :|:.|||.:....||.:.|:|.|::....:..|.|::||
 Worm   243 LKKMDVGGSSDPYVKIYL--HHGRKLLSKKKTSRKYKTLNPYYNESFQFKIEPHMIEKVHLIVSV 305

  Fly   536 YAKRHMKKNEMVGWFSLGLNSSGSEEVAH-----WADVCEMPKGEMLARWHVL 583
            :....|.||:.:|..:||.......::.|     ||::  |.....:.:||.|
 Worm   306 WDYDKMSKNDFIGEVTLGSKHLNLPQITHACSEQWAEM--MTSRRPVVQWHTL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 33/123 (27%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 35/144 (24%)
snt-2NP_497261.2 C2 85..206 CDD:301316 34/123 (28%)
C2B_Synaptotagmin-1 217..357 CDD:176047 35/144 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.