DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt14 and snt-4

DIOPT Version :9

Sequence 1:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_491853.2 Gene:snt-4 / 172346 WormBaseID:WBGene00004924 Length:381 Species:Caenorhabditis elegans


Alignment Length:339 Identity:87/339 - (25%)
Similarity:152/339 - (44%) Gaps:44/339 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 PSSNNNDDEPLFDTSDLRSIKSDDLLVGVDQKEPAVQRGPIELELSLLYDAPMRKMTVHVMQAKN 316
            |.||::...|:....:|    .:|....:...|...:||.|...||  ||:....:.|.::..:|
 Worm    79 PLSNDSTPSPVVPLQNL----LEDRTRKLSPSELPSERGNISFTLS--YDSHTLTLLVSIINCRN 137

  Fly   317 LPPL---GSGQ-TTHTQVRMLMLPSKKQKLKTKI-RSGENPQYMESFLLHRVNPEDVNNMGLRVR 376
            |..:   ..|| .....|::.:||.::.::||:| ||..:|.|.|.|.::.|..|.||...|..:
 Worm   138 LCEMVVSRDGQCLLDPYVKLQLLPEREHRVKTRIVRSTTSPVYEEQFAMYGVTHEQVNFATLHFQ 202

  Fly   377 LYGCERLRKERLIGEAYVSFATVDLEL--ETNLWLPLEPRNTSSGLGSTSDLLSLARSESAGSTS 439
            :...:|..::.::||.....|..:|::  |..:.|||.||.|.:         ..||        
 Worm   203 VVAFDRYSRDTVVGECVYRLADAELQVHNEMRVELPLLPRATDT---------VAAR-------- 250

  Fly   440 SMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSLSLNKAPDTYVKMVMVSSIGQEISRAKTSI 504
                   .||||.|:|......|:|.::|.......:.....|.:||:.:....|:.|.:.:|.:
 Worm   251 -------GELLLSLTYQAAFNNLTVVVLKARGLGGRNDAGTADPFVKLYLRKESGERIVKKRTHV 308

  Fly   505 RRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSEEVAHWADVC 569
            ||...||::.|:|.|::...:|....:.:.|.....:.:|:::|...|.:..|      |..:|.
 Worm   309 RRSTLNPVYNESFVFELPDDRLEHSVIDLQVINHDRVNRNDVIGRALLNMEDS------HVVEVL 367

  Fly   570 EMPKGEMLARWHVL 583
            |.| |..:|:||.|
 Worm   368 ENP-GRQVAQWHHL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 36/128 (28%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 37/138 (27%)
snt-4NP_491853.2 C2A_Synaptotagmin-4-11 111..241 CDD:176034 38/131 (29%)
C2 250..381 CDD:301316 38/153 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.