DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Suv3 and tst

DIOPT Version :9

Sequence 1:NP_001303458.1 Gene:Suv3 / 40543 FlyBaseID:FBgn0037232 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001262884.1 Gene:tst / 42813 FlyBaseID:FBgn0039117 Length:1197 Species:Drosophila melanogaster


Alignment Length:909 Identity:165/909 - (18%)
Similarity:294/909 - (32%) Gaps:342/909 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SRKKPETNLSTLFKPVQVHAYVDSEDVGSELSGKLEKAELLKILNKFTQRREIKSLCNENGLDDY 105
            :|.:..::..|...|.|.:..:.||:. .::...:.||:|..:||..|..:..||        |:
  Fly   180 TRSEETSSTGTPKSPKQSNVQLPSEEF-RDVDDHIMKADLKPVLNISTTTKNFKS--------DW 235

  Fly   106 LQ----QQAFGSFRRFCIEAENLPVDLHITFSDITQGAGHIDDIFPYFLRHAKTVFPHLDCMDDL 166
            .:    .|...:|:      |.:|...             :|  ||:.|    .||       ..
  Fly   236 AEMVDISQPINNFK------EQIPCPA-------------MD--FPFEL----DVF-------QK 268

  Fly   167 KKISDLRQPANWYSNARAITRKIVFHAGPTNSGKTYHAMERYLSAKTG----VYCGPLKLLATEV 227
            :.|..|.|            |:.||.|..|::|||..|......:|..    :|..|:|.|:.:.
  Fly   269 QAILKLEQ------------RQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQK 321

  Fly   228 YNKANERGTPCDLVTGEERKFGISESLPANHVACTVEM--------TSVNTPYEVAVIDEIQQIR 284
            |....:......|:||:     :.....|:.:..|.|:        :.|....|..:.||:..|.
  Fly   322 YRDFRKTFKDVGLITGD-----LQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYIN 381

  Fly   285 DPQRGWAWTRAFLGLIADEVHV----CGEPGALDLLQKICETTGETVEVRLYDRLT--------- 336
            :|:||..|....: |:.:.|::    ...|..|:|    .:..|.|.:.::|...|         
  Fly   382 NPERGHVWEEVII-LLPEHVNIIMLSATVPNTLEL----ADWVGSTKKRKVYVISTLKRPVPLTH 441

  Fly   337 -----------------------------ELTVEN--------------------------TALG 346
                                         |..||.                          |.:|
  Fly   442 FLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVERKKEMQGKAKGGGGGPRNHLNAKQEQYTWIG 506

  Fly   347 SLD-----NIVPGDCIVCFS--------------KHDIYT------------------------- 367
            .:|     |::|   :|.|:              ..|:.|                         
  Fly   507 LIDFLRRSNMMP---VVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQKFFLQCLAKLKPPDRTI 568

  Fly   368 ----VSREIEARGKEVAVIYGGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFY 428
                |.::...||  :.|.:.|:.|..|......|.:  ...|::.||:...||:|:..|.::| 
  Fly   569 PQVLVLKDALERG--IGVHHSGILPILKEIVEMLFQN--GLVKLLFATETFAMGVNMPARTVVF- 628

  Fly   429 SLIKPSMNERGEREIDTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILARTPEPIK 493
                .|..:....|:..:.....:|:|||||| |...|.|  ||.                  |.
  Fly   629 ----DSCKKFDGLEMRNLKPGEYIQMAGRAGR-RGHDETG--TAI------------------IM 668

  Fly   494 QAGLHPTADQIELYAYHLPSSSLSNLMDIFVNLCT--------VDDSLYFMCNIEDFKFLAEMIQ 550
            ..|..|.:.::......||....|..:..:..:.|        |:|.:.|  :.::|....::  
  Fly   669 CKGSVPPSMELRPMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKF--SFKEFNLKLQL-- 729

  Fly   551 HVALPLRARYVFCCAPINRKMPFVCSMFLKVARQYSRNEPITFDFIKKNCGWPFKLPKTILDLVH 615
                           |..:|.       |::|..                  .|.:..|:.:  |
  Fly   730 ---------------PTQQKQ-------LRLAED------------------KFAMLPTLGE--H 752

  Fly   616 LEAVFDVMD--LYLWL-SYRFMDLFPEAAYVRDAQKELDE----IIQQGV-FQITRLLKNTEASQ 672
            |:.:.:..|  :..|. .:|.|........:   ||||..    :|.||. :....:|.||: |.
  Fly   753 LQPLVNFYDKAVEYWKEKHRIMKFVVTQPKI---QKELKAGRVIVITQGKHYNKLAILLNTK-SV 813

  Fly   673 DGETSNYAIRRITH-VKEPRLPSLSRGRLTERLLAQGLLTPGML--------------------- 715
            .|:.:.|.:..:.| .|.....||.:|.|..::|:   |||..:                     
  Fly   814 PGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKILS---LTPRNMTFQPVGIGGHTVLDIKAIDII 875

  Fly   716 ----SELR-------KEWDAQQLG------------KSNSQSNENSEPVVNSDDEDNYSGIGRK 756
                |.|:       :.|:.:||.            |:.::.|:.:|..:::.|...|..:.::
  Fly   876 SITKSTLKVDADAIIRNWEQRQLERFKDSPPSGSVVKAVTELNQLNESYIDNPDNIKYVNLSKE 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Suv3NP_001303458.1 DEXDc 193..323 CDD:238005 32/145 (22%)
SrmB 195..507 CDD:223587 80/439 (18%)
HELICc <357..461 CDD:238034 28/146 (19%)
SUV3_C 614..657 CDD:289293 11/49 (22%)
tstNP_001262884.1 Dob10 193..1194 CDD:226947 163/896 (18%)
DEAD 267..414 CDD:278688 36/164 (22%)
HELICc 578..658 CDD:197757 24/89 (27%)
rRNA_proc-arch 715..996 CDD:289976 47/278 (17%)
DSHCT 1025..1188 CDD:285374
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12131
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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