DRSC/TRiP Functional Genomics Resources

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Protein Alignment Suv3 and Supv3l1

DIOPT Version :10

Sequence 1:NP_649452.3 Gene:Suv3 / 40543 FlyBaseID:FBgn0037232 Length:763 Species:Drosophila melanogaster
Sequence 2:XP_038954515.1 Gene:Supv3l1 / 294385 RGDID:1305565 Length:788 Species:Rattus norvegicus


Alignment Length:736 Identity:421/736 - (57%)
Similarity:528/736 - (71%) Gaps:43/736 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KKPETNLSTLFKPVQVHAYVDSE--DVGSELSGKLEKAELLKILNKFTQRREIKSLCNENGLDDY 105
            |.|.|   :||.|:.|.....|.  |||:||:..|:|.|:.|||:||.:|:||:.|..:.|||..
  Rat    57 KAPNT---SLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKILDKFYKRQEIQKLSADYGLDAR 118

  Fly   106 LQQQAFGSFRRFCIEAENLPVDLHITFSDITQGAGHIDDIFPYFLRHAKTVFPHLDCMDDLKKIS 170
            |..|||.|||.:.:::.:|.||:||..:||...|.|:||:||:||||||.:||.|:|.|||::||
  Rat   119 LFHQAFISFRNYIMQSHSLDVDIHIVLNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDLRQIS 183

  Fly   171 DLRQPANWYSNARAITRKIVFHAGPTNSGKTYHAMERYLSAKTGVYCGPLKLLATEVYNKANERG 235
            |||:|.|||..||||.|||:||:|||||||||||::|||||.:|||||||||||.|::.|:|..|
  Rat   184 DLRRPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPLKLLAHEIFEKSNAAG 248

  Fly   236 TPCDLVTGEERKFGISESLPANHVACTVEMTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLI 300
            .||||||||||.....|...|.||:|||||.:|.||||||||||||.||||.||||||||.|||.
  Rat   249 VPCDLVTGEERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEIQMIRDPARGWAWTRALLGLC 313

  Fly   301 ADEVHVCGEPGALDLLQKICETTGETV------------EVRLYDRLTELTVENTALGSLDNIVP 353
            |:|||:|||..|:||:.::..||||.|            ||:.|:|||.::|.:.||.||||:.|
  Rat   314 AEEVHLCGESAAIDLVTELLYTTGEEVEGPVCGKPQKPEEVQKYERLTPISVLDRALESLDNLRP 378

  Fly   354 GDCIVCFSKHDIYTVSREIEARGKEVAVIYGGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGL 418
            |||||||||:|||:|||:||.||.|.|||||.||||||||||.|||||.:.||::||||||||||
  Rat   379 GDCIVCFSKNDIYSVSRQIEIRGLESAVIYGSLPPGTKLAQARKFNDPNDPCKILVATDAIGMGL 443

  Fly   419 NLSIRRIIFYSLIKPSMNERGEREIDTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQR 483
            ||||||||||||||||:||:||:|::.|:.|.|||||||||||.:.::.|.||....:||..|:.
  Rat   444 NLSIRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRAGRFSSHFKEGEVTTMHRDDLALLKE 508

  Fly   484 ILARTPEPIKQAGLHPTADQIELYAYHLPSSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEM 548
            ||.|..:||:.|||||||:|||::|||||.::||||:||||:...||.. ||:||::||||.||:
  Rat   509 ILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQVDGQ-YFVCNMDDFKFSAEL 572

  Fly   549 IQHVALPLRARYVFCCAPINRKMPFVCSMFLKVARQYSRNEPITFDFIKKNCGWPFKLPKTILDL 613
            |||:.|.||.|||||.||||:|.|||||..|:.|||||||||:||.::::...||...||.|.||
  Rat   573 IQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDL 637

  Fly   614 VHLEAVFDVMDLYLWLSYRFMDLFPEAAYVRDAQKELDEIIQQGVFQITRLLKNTEA-------- 670
            :.||||.||.||||||||||:|:||::::||..|||||.|||:||..||:|:|.:|:        
  Rat   638 MDLEAVHDVFDLYLWLSYRFIDMFPDSSFVRSLQKELDVIIQEGVHNITKLIKISESHKLLNLEP 702

  Fly   671 ----SQDGETSNYAIRRITHVK------EPRLPSLSRGRLTERLLAQGLLTPGMLSELRKEWDAQ 725
                |:....|....||....|      ||..||.....|..||:.|||||..||.:|:|||..|
  Rat   703 SGSQSRLPGASKSPARRTRGTKTGNKAAEPPSPSDKELPLASRLVQQGLLTADMLKQLQKEWLTQ 767

  Fly   726 -------QLGKSNSQSNENSE 739
                   ::|....:.:.||:
  Rat   768 RPEQGKEKVGTRRKKKDPNSD 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Suv3NP_649452.3 Suv3_N 51..166 CDD:436283 56/116 (48%)
DEXQc_Suv3 187..332 CDD:350671 100/156 (64%)
SF2_C_suv3 336..474 CDD:350192 98/137 (72%)
Suv3_C_1 546..586 CDD:436308 27/39 (69%)
SUV3_C 614..658 CDD:463616 29/43 (67%)
Supv3l1XP_038954515.1 Suv3_N 62..179 CDD:436283 56/116 (48%)
DEXQc_Suv3 200..341 CDD:350671 97/140 (69%)
SF2_C_suv3 361..499 CDD:350192 98/137 (72%)
Suv3_C_1 570..610 CDD:436308 27/39 (69%)
SUV3_C 638..684 CDD:463616 31/45 (69%)

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