DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps24 and VPS24.2

DIOPT Version :10

Sequence 1:NP_649451.1 Gene:Vps24 / 40542 FlyBaseID:FBgn0037231 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_190086.1 Gene:VPS24.2 / 823635 AraportID:AT3G45000 Length:200 Species:Arabidopsis thaliana


Alignment Length:197 Identity:75/197 - (38%)
Similarity:120/197 - (60%) Gaps:10/197 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTL 98
            :..|:|||..|.:::|.:.::||..|...||:|||::|:.:.|:|.:||.:|||.|.:...::|.
plant     7 LSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATA 71

  Fly    99 RVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASK 163
            ...|:|.||.||::.:.||::.||:|..|:..||||.|.|:|||.:.:.:|:..:||::|||..:
plant    72 VTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEEEIEE 136

  Fly   164 EVDKVLWEITDGKLGEAPLPPEATPADKASASAARVEAEQDDE---EG----EELQEMQSRLASL 221
            ||||||..|......|.   |||....|.:..|.:.|....::   ||    |||:.::.|||::
plant   137 EVDKVLTAIAGETAAEL---PEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANV 198

  Fly   222 RS 223
            ||
plant   199 RS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps24NP_649451.1 Snf7 18..187 CDD:460896 61/152 (40%)
VPS24.2NP_190086.1 Snf7 10..156 CDD:460896 60/148 (41%)

Return to query results.
Submit another query.