DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps24 and CHMP1A

DIOPT Version :9

Sequence 1:NP_001303457.1 Gene:Vps24 / 40542 FlyBaseID:FBgn0037231 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_011521400.1 Gene:CHMP1A / 5119 HGNCID:8740 Length:408 Species:Homo sapiens


Alignment Length:11 Identity:6/11 - (54%)
Similarity:6/11 - (54%) Gaps:0/11 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 EQDDEEGEELQ 212
            |...|.||.||
Human    10 EAGQEGGEGLQ 20

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps24NP_001303457.1 Snf7 18..187 CDD:281366
CHMP1AXP_011521400.1 PHA03269 90..>197 CDD:165527
PHA03269 153..>267 CDD:165527
PHA03269 249..>365 CDD:165527
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5491
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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