Protein Alignment Vps24 and Chmp1a

DIOPT Version :9

• Sequence 1: NP_001303457.1
• Gene: Vps24 / 40542
• FlyBaseID: FBgn0037231
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001076782.1
• Gene: Chmp1a / 365024
• RGDID: 1311083
• Length: 196
• Species: Rattus norvegicus
• Alignment Length: 211
• Identity: 35/211 - (16%)
• Similarity: 97/211 - (45%)
• Gaps: 30/211 - (14%)

  Fly    22 KIRKEGNQLDRQIRSIQR----EEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKA 82
            :::....||::..:..::    |:.|||::|:   |||.....|.....|....:.:|.:..: :
  Rat     7 QLKFTAKQLEKLAKKAEKDSKAEQAKVKKALQ---QKNVECARVYAENAIRKKNEGVNWLRMA-S 67

  Fly    83 HLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDET 147
            .::::..:::..::...|..::.:.|:.|....|.:...:::.:|....:::....:...:::::
  Rat    68 RVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTSVMEDS 132

  Fly   148 MDSLEESEELEEEASKEVDKVLWEITDGKLGE-----APLPPEATPADKASASAARVEAEQDDEE 207
            :.|.......:|    :||.::.:|.:....|     :.||..|:...::|     |.:::|
  Rat   133 VSSATTLTTPQE----QVDSLIVQIAEENGLEVLDQLSQLPEGASAVGESS-----VRSQED--- 185

  Fly   208 GEELQEMQSRLASLRS 223
                 ::..|||:||:
  Rat   186 -----QLSRRLAALRN 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps24	NP_001303457.1	Snf7	18..187	CDD:281366	26/173 (15%)
Chmp1a	NP_001076782.1	Snf7	12..195	CDD:419749	33/203 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5491
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810