Protein Alignment Vps24 and RGD1566265

DIOPT Version :9

• Sequence 1: NP_001303457.1
• Gene: Vps24 / 40542
• FlyBaseID: FBgn0037231
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001128061.1
• Gene: RGD1566265 / 363487
• RGDID: 1566265
• Length: 199
• Species: Rattus norvegicus
• Alignment Length: 214
• Identity: 49/214 - (22%)
• Similarity: 89/214 - (41%)
• Gaps: 54/214 - (25%)

  Fly    29 QLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNAR-KAINRIYTSKAHLNSIQMQMK 92
            :|:|..:...:||:..|..:|:|.||.:.:...|.|:..:..: :|||.:..| |.::::..:::
  Rat    17 ELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMS-ARVDAVAARVQ 80

  Fly    93 NQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDETMDSLE----- 152
                |....|.:.||               :||:::.|...:....:  |.:...||..|
  Rat    81 ----TAVTMGKVTKS---------------MAGVVKSMDATLRSMNL--EKISALMDKFEHQFET 124

  Fly   153 ---ESEELEEEAS---------KEVDKVLWEITDGKLGEA--PLPPEATPADKASASAARVEAEQ 203
               :::::|:..|         .:||.:|.|:.|    ||  .|..|.......|..|:....||
  Rat   125 LDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMAD----EAGLDLNMELPQGQTGSVGASVASTEQ 185

  Fly   204 DDEEGEELQEMQSRLASLR 222
            |        |:..|||.||
  Rat   186 D--------ELSQRLARLR 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps24	NP_001303457.1	Snf7	18..187	CDD:281366	38/177 (21%)
RGD1566265	NP_001128061.1	Snf7	49..>165	CDD:419749	27/141 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5491
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810