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Protein Alignment Vps24 and Chmp3

DIOPT Version :9

Sequence 1:	NP_001303457.1	Gene:	Vps24 / 40542	FlyBaseID:	FBgn0037231	Length:	223	Species:	Drosophila melanogaster
Sequence 2:	NP_758834.1	Gene:	Chmp3 / 282834	RGDID:	708556	Length:	223	Species:	Rattus norvegicus

Alignment Length:	228	Identity:	135/228 - (59%)
Similarity:	179/228 - (78%)	Gaps:	10/228 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MGLFGRTPSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAK 65
            |||||:|..|.|||.|.||:.|||||...:|||||.|||||||||||:|.||:|..::.||:|||
  Rat     1 MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAK 65

  Fly    66 EIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDM 130
            |::.:|||::::|.||||:||:.|.|||||:.|||||||||||||::||||||:.||:...||::
  Rat    66 EMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMREL 130

  Fly   131 SKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEITDGKLGEAPLP-----PEATPAD 190
            ||||||||||||||::|.:|:::.||:||.|..|:|::|:|||.|.||:||..     ||..||.
  Rat   131 SKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPAG 195

  Fly   191 KASASAARVEAEQDDEEGEELQEMQSRLASLRS 223
            ..:||    |.:::|:| |:|:.||||||:|||
  Rat   196 AMAAS----EGDEEDDE-EDLEAMQSRLATLRS 223

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.