DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps24 and CHMP2B

DIOPT Version :10

Sequence 1:NP_649451.1 Gene:Vps24 / 40542 FlyBaseID:FBgn0037231 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001397706.1 Gene:CHMP2B / 25978 HGNCID:24537 Length:245 Species:Homo sapiens


Alignment Length:195 Identity:50/195 - (25%)
Similarity:110/195 - (56%) Gaps:5/195 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTS 80
            ::|...::|.....:.|...:::::|::::..:|:.|:..:::.|.:|||::|:.||...|.:..
Human    46 IKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAV 110

  Fly    81 KAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLD 145
            .:.:.|:..|.|...|.:::||::..:.:.:||:...:...:....|::..||.||..:.|||::
Human   111 SSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMIN 175

  Fly   146 ETMDSLEESEELEEEASKEVDKVLWEI---TDGKLGEAPLPPEATPADKASASAARVEAEQDDEE 207
            :|:|.:.:..:.|||:...|::||.||   ..||:.:||....:.|:  ||.|.|.:..|:.:.:
Human   176 DTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPS--ASTSKATISDEEIERQ 238

  Fly   208  207
            Human   239  238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps24NP_649451.1 Snf7 18..187 CDD:460896 44/171 (26%)
CHMP2BNP_001397706.1 Snf7 48..217 CDD:460896 44/168 (26%)

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