DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps24 and Vps2

DIOPT Version :10

Sequence 1:NP_649451.1 Gene:Vps24 / 40542 FlyBaseID:FBgn0037231 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_321862.3 Gene:Vps2 / 1281892 VectorBaseID:AGAMI1_011352 Length:232 Species:Anopheles gambiae


Alignment Length:234 Identity:55/234 - (23%)
Similarity:109/234 - (46%) Gaps:21/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFGRTPSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEI 67
            |||:..|  |.|.:::....:.|....|||:...::::|:|:...:|:.|::|..|...|:||::
Mosquito     4 LFGKRMS--PDEMMRKNQRALNKAMRDLDREKMKMEQQEKKIIADIKKLAKENQMDAVKIMAKDL 66

  Fly    68 VNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSK 132
            |..|:.:.:....||::.::.::::...|...:..:::..|:.:..|...:..|::..|:.:..|
Mosquito    67 VRTRRYVRKFMLMKANIQAVSLKIQTLKSQNAMGEAMKGVTKAMTNMNRQLNMPQIQKILHEFEK 131

  Fly   133 EMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEI-------------TDGKLG-EAPLP 183
            :.....:.|||:::.||...|.|..|||....|.:||.|:             ..|.|. .....
Mosquito   132 QSEIMDMKEEMINDAMDDAMEDEGDEEETDAIVSQVLDELGLQLNDQLSGLPQASGSLAVSGAKV 196

  Fly   184 PEATPADKASASAARVEAEQDDEEGEELQEMQSRLASLR 222
            |:|.....|..|........|.:     .::|:||.:||
Mosquito   197 PQAAAVGAAGGSGGAGSPVSDAD-----ADLQARLDNLR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps24NP_649451.1 Snf7 18..187 CDD:460896 40/182 (22%)
Vps2XP_321862.3 Snf7 17..183 CDD:460896 37/165 (22%)

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