DRSC/TRiP Functional Genomics Resources

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Protein Alignment MP1 and psh

DIOPT Version :9

Sequence 1:NP_001303421.1 Gene:MP1 / 40541 FlyBaseID:FBgn0027930 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:435 Identity:136/435 - (31%)
Similarity:186/435 - (42%) Gaps:98/435 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 WMLLMGT------SSTYAQEIFG-YCRTPDENSGTCINLRECGYLFE-LLQSEEVTEQDRRFLQA 67
            |.||:||      ||..|....| .|:..|...|.|....:|..|.: .::|..:|..|     .
  Fly     5 WSLLLGTFVLISCSSVEAAVTVGRACKVTDTMPGICRTSSDCEPLIDGYIKSGVLTLND-----V 64

  Fly    68 SQCGYRN-GQVLEKHFCFTNVQICCANSRM------------------RNQQPQWGNHPQPTQTT 113
            ..||... |::    || ...:.||.||.:                  |...|.:|:..:|....
  Fly    65 PSCGLGAWGEI----FC-CPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAA 124

  Fly   114 ------KPTKRSGTKLLPMAPNCGENFGDRVVGGNETTKREFPWMALIEYTKPGNVKGHHCGGSL 172
                  :..:|||.:|:           ..:|||.......:|.||.|.|...|.  ...|||||
  Fly   125 CKKIRERKQQRSGNQLV-----------IHIVGGYPVDPGVYPHMAAIGYITFGT--DFRCGGSL 176

  Fly   173 INHRYVLTAAHCVSAIPSDWELTGVRLGEWDASTNPDCTVGKNGRRDCNEPYVDYPVEERIPHPQ 237
            |..|:||||||||:.               ||:|.....:|.....:.:..|.|..:.....|||
  Fly   177 IASRFVLTAAHCVNT---------------DANTPAFVRLGAVNIENPDHSYQDIVIRSVKIHPQ 226

  Fly   238 YPGNSRDQLNDIALLRLRDEVQYSDFILPVCLPTLASQHNNIFLGRKVVVAGWG--RTETNFTSN 300
            |.||   :.||||:|.|..:|..:|.|.|.||.|.|:...:   ..|..|||||  ...|...|.
  Fly   227 YVGN---KYNDIAILELERDVVETDNIRPACLHTDATDPPS---NSKFFVAGWGVLNVTTRARSK 285

  Fly   301 IKLKAELDTVPTSECNQRYATQ-------RRTVTTKQMCAGGVEGV-DSCRGDSGGPLL----LE 353
            |.|:|.|:.||..:||..||.|       ::.|....:||...:.: |:|:|||||||:    :|
  Fly   286 ILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNVE 350

  Fly   354 DYSNGNSNYYIAGVVSYGPTPCGLKGWPGVYTRVEAYLNWIENNV 398
            |     ..|.|.||:|.| ..|... .||:||||.:||::||..|
  Fly   351 D-----GMYTIMGVISSG-FGCATV-TPGLYTRVSSYLDFIEGIV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MP1NP_001303421.1 CLIP 29..91 CDD:288855 14/63 (22%)
Tryp_SPc 137..394 CDD:214473 98/270 (36%)
Tryp_SPc 138..397 CDD:238113 100/272 (37%)
pshNP_573297.1 CLIP 30..79 CDD:197829 14/58 (24%)
Tryp_SPc 143..384 CDD:214473 98/270 (36%)
Tryp_SPc 144..387 CDD:238113 100/272 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437436
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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