DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl11 and Mmel1

DIOPT Version :9

Sequence 1:NP_649449.1 Gene:Nepl11 / 40540 FlyBaseID:FBgn0037230 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:708 Identity:144/708 - (20%)
Similarity:249/708 - (35%) Gaps:194/708 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LDTSKQPCQDFYGYVCS----HSANLSETGRQR--FQSLLKETDV---AQLMDMELQ-------L 87
            :|.||:||.:||.|.|.    |.. :.||..:.  |..|..|.:|   ..|.|..:|       .
  Rat   101 MDQSKKPCDNFYQYACGGWLRHHV-IPETNSRYSVFDILRDELEVILKGVLEDSSVQHRPAVEKA 164

  Fly    88 INFFKSCESGRGVEALKGSQLYR---QSGGWPSLEPNKVNASQRTNQT-------QRWLGLLG-- 140
            ...::||.:...:|......|..   ..||||.       |..:.|:|       :|.|.:|.  
  Rat   165 KTLYRSCMNQSVIEKRDSEPLLNVLDMIGGWPV-------AMDKWNETMGPKWELERQLAVLNSQ 222

  Fly   141 YFHEVGAPYFFETSVTMQSNKRLVVLQPD---GTRRNTLRKFEQRVGEVLQSFG----------- 191
            :...|....|........|...:.:.||.   .:|....::...||.|....|.           
  Rat   223 FNRRVLIDLFIWNDDQNSSRHVIYIDQPTLGMPSREYYFKEDSHRVREAYLQFMTSVATMLRRDL 287

  Fly   192 --------IEQSRAHVTALE-----VLSLERSRRDIVKADH----VEDQVQFSYGNFKRIVFGNA 239
                    :::..|.|..||     ....:..|.|:....|    .|.|.:|....|        
  Rat   288 NLPGETDLVQEEMAQVLHLETHLANATVPQEKRHDVTALYHRMGLEELQERFGLKGF-------- 344

  Fly   240 SLIRLDWDGYFRKLLGGKTPQ--ASDTIVVKQLP------RLVEYF--ALLQNTSMVRL-LNWIW 293
                 :|..:.:.:|.....:  .::.:||..:|      .:::.|  ..|||..:.|| |:.|.
  Rat   345 -----NWTLFIQNVLSSVQVELLPNEEVVVYGIPYLENLEEIIDVFPAQTLQNYLVWRLVLDRIG 404

  Fly   294 T----------DY--------LMDIVDADC----HQLSETYAGDLYAHVVQRVTA--NRVELAQM 334
            :          ||        :.::...:|    :...|:..|.||   ::|..:  ::..::::
  Rat   405 SLSQRFKEARVDYRKALYGTTMEEVRWRECVSYVNSNMESAVGSLY---IKRAFSKDSKSIVSEL 466

  Fly   335 YSELGKAYTDQLGGSVWIDEISRQSS-------RQFLGNIMHTTLNGDERLDAAYHSILLGRRSL 392
            ..::...:.|.|....|:||.|::.:       |:.:|...:...:.:..||..|.|:.......
  Rat   467 IEKIRSVFVDNLDELNWMDEESKKKAQEKALNIREQIGYPDYILEDNNRHLDEEYSSLTFSEDLY 531

  Fly   393 YRNLEKLRKFQRTRRLASHSAQQVRRYAQM------FAPVNAFLGQHN---------LSTP---- 438
            :.|     ..|..:..|..|.:::|.....      .|.||||...:.         |..|    
  Rat   532 FEN-----GLQNLKNNAQRSLKKLREKVDQNLWIIGAAVVNAFYSPNRNLIVFPAGILQPPFFSK 591

  Fly   439 -----LNY----LLLGEFFSRSLVAAGSSSRTQG---AWRSSDSERRFAIFQQCV---------- 481
                 ||:    :::|...:......|.:....|   .|.|:.|.|.|....||:          
  Rat   592 DQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMLDWWSNFSARHFRQQSQCMIYQYSNFSWE 656

  Fly   482 ---GKQTNAIDLLLSLLAQ----RQALSAYGQWLATQAGLVERVDAVLAAGSSKMSLQRLFFVTS 539
               .:..|....|...:|.    |||..||.|||| :.|..:|:..:      .::..:|||:..
  Rat   657 LADNQNVNGFSTLGENIADNGGVRQAYKAYLQWLA-EGGRDQRLPGL------NLTYAQLFFINY 714

  Fly   540 LLVDCRS-----ELGALQQDRKRQVTH---ATLRNSPEFLEAFRCRPGDVLYPQDQRC 589
            ..|.|.|     .:.:::.|....:.:   .:|:|.|.|.|||.|..|..::|.: ||
  Rat   715 AQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQNLPGFSEAFHCPRGSPMHPMN-RC 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl11NP_649449.1 GluZincin 45..589 CDD:301352 139/700 (20%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 141/703 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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