DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl11 and nep-1

DIOPT Version :10

Sequence 1:NP_649449.1 Gene:Nepl11 / 40540 FlyBaseID:FBgn0037230 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_496490.2 Gene:nep-1 / 174787 WormBaseID:WBGene00013926 Length:754 Species:Caenorhabditis elegans


Alignment Length:732 Identity:152/732 - (20%)
Similarity:241/732 - (32%) Gaps:227/732 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SHNLEPYLDTSKQPCQDFYGYVC-----SHSANLSETGRQRF----QSLLKE--------TDVAQ 79
            |..|:..|:.|..||.||:.|.|     ||......|...:|    :.:|.|        |.:..
 Worm    73 SRLLQKSLNLSLDPCDDFFEYACRAWVDSHPIPDDLTSYSQFTATREKVLAEMRKLYEDNTSIPT 137

  Fly    80 LMDMEL--QLINFFKSCESGRGVEALKGSQLYRQSGGWPSLEPNKVN------------------ 124
            ...:.|  |:.|.....|....|.|....:..:..|.||.:...|..                  
 Worm   138 SKSIALIKQIYNTCMDTEKHNAVGARDLLEKIKTYGYWPMVHNEKWRESTFDLTKLLSNTIQSRD 202

  Fly   125 ---------ASQRTNQTQRWL----GLLGYFHEVGAPYFFETSVTMQSNKRLVVLQPDGTRRNTL 176
                     |....|.::|.|    |.||..:.....|..|.....|..         ..|:.|:
 Worm   203 VSVFFDFGPAEDSRNVSRRLLSFDQGSLGLGYSTRDYYLDEKKYEKQMK---------AYRKYTI 258

  Fly   177 ---RKFEQRVGEVLQSFGIEQSRAHVTALE-----VLSLERSRRDIVKADHVEDQVQFSYGNFKR 233
               |.:.:..|..:....||.....:.|.|     :|..|..||:..|..:|.     .:.:.|.
 Worm   259 GKVRYYTEDAGMAVNESKIESDVDEIIAFEKEWAQILVAEEDRRNYTKLYNVR-----RFDDLKE 318

  Fly   234 IVFGNASLIRLDWDGYFRKLLGGKTP-------QASDTIVVKQLPRLVEYFALLQNTSMVRLLNW 291
            .:    |:|  ||    :||....||       :.:.:|::..:..|.:...|||||....:.|:
 Worm   319 YM----SII--DW----KKLTLSTTPFLVHSYLKTNPSIIISDVEYLQKMNTLLQNTDPRIVTNY 373

  Fly   292 I-------WTDYL-------------------------MDIVDADCHQLSETYA-GDLYAHVVQR 323
            |       |:..:                         .|.|.:...:||  || |.:|......
 Worm   374 ILLRWAGSWSQEIGKKYEDLQQEFAFQMYGRKQRQPRWKDCVSSAGGKLS--YASGSMYVRKYFD 436

  Fly   324 VTANRVELAQMYSELGKAYTDQLGGSVWID----EISRQSSRQFLGNIMHT--TLNGDERLDAAY 382
            ..|....| .|.::|.:|:.:.:..:.|:|    :.:.:.:.|.|..|.:.  .|| ||:||..|
 Worm   437 ANAKNTTL-DMITDLQEAFRNMMHANDWMDAETKKYALEKADQMLKQIGYPDFILN-DEKLDDWY 499

  Fly   383 HSI---------------LLGRRSLY--RNLEKLRKFQRTRRLASHSAQQVRRYAQMFAPVNAFL 430
            ..:               :..|.:.|  |.||.:.:|:               :....|.||||.
 Worm   500 KGLEGAPEDSFSQLVEKSIQWRNNFYYRRLLEPVNRFE---------------FISSAAVVNAFY 549

  Fly   431 G--QHNLSTP----------------LNY----LLLGEFFSRSLVAAGSSSRTQGAWR------- 466
            .  ::.::.|                |||    .::|...:......|......|..|       
 Worm   550 SPTRNAIAFPAGILQQPFFDARFPKALNYGGIGAVIGHEITHGFDDTGRQFDNVGNLRDWWDNTT 614

  Fly   467 -SSDSERRFAIFQQCVGKQTNAIDLLLS-LLAQ----------RQALSAYGQWLATQAGLVERVD 519
             |..:||...|.:|....:....||.:: .|.|          :||..||..:|....|...|:.
 Worm   615 SSKFNERTQCIIEQYADVKLRGTDLRINGKLTQGENIADNGGIKQAFKAYKSYLEKHGGQEARLP 679

  Fly   520 AVLAAGSSKMSLQRLFFVTSLLVDCRSELGALQQDRKRQV------------THATLRNSPEFLE 572
            ..     ..::.::||||....|.|    ||...:.|..:            .:..|.|.|||.|
 Worm   680 QF-----ESLTNEQLFFVGYAQVWC----GAKTPETKTLLLLTDPHSPETARVNTVLTNQPEFAE 735

  Fly   573 AFRCRPGDVLYPQDQRC 589
            ||:|..|..:.| .:||
 Worm   736 AFKCPAGSPMNP-TKRC 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl11NP_649449.1 GluZincin 45..590 CDD:472708 148/719 (21%)
nep-1NP_496490.2 M13 85..751 CDD:341056 146/718 (20%)

Return to query results.
Submit another query.