DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9766 and psmd10

DIOPT Version :9

Sequence 1:NP_001097672.1 Gene:CG9766 / 40539 FlyBaseID:FBgn0037229 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001016356.1 Gene:psmd10 / 549110 XenbaseID:XB-GENE-946051 Length:227 Species:Xenopus tropicalis


Alignment Length:141 Identity:48/141 - (34%)
Similarity:68/141 - (48%) Gaps:3/141 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GEMCIIDLLLSAGCSVHIGDPGSGRTPLHLAFYYGHLPSARILLNKKARLEATDSNGMTPAHCAV 234
            |...:.:.||..|..|...| .:|.||||:|...|.....|.|:.|.|::.|.:..|.||.|.|.
 Frog    52 GRTEVAEYLLRLGVPVDAKD-DAGWTPLHIAASAGRDDIVRALIGKGAQVNAANQIGCTPLHYAA 115

  Fly   235 DANQLEIVKFALEAGANAEARDVCGWTLLMRAVVMNASMELIKVLVTHGADLAALDGVGKTCTDL 299
            ..|:.||....||.||:.:|:|....|.|.|| ....::.::::|:.|.|.....|..|.|...|
 Frog   116 SKNKHEIALMLLENGASPDAKDNLESTPLHRA-ASKGNLRIVQILLKHQASTNIQDTEGNTPLHL 179

  Fly   300 AKLYHR-QEAK 309
            |....| :|||
 Frog   180 ACDEERVEEAK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9766NP_001097672.1 FN3 35..98 CDD:214495
ANK 128..244 CDD:238125 26/73 (36%)
ANK repeat 128..156 CDD:293786
Ank_2 129..223 CDD:289560 18/52 (35%)
ANK repeat 158..189 CDD:293786 5/18 (28%)
ANK repeat 192..223 CDD:293786 12/30 (40%)
ANK 193..311 CDD:238125 42/118 (36%)
Ank_2 197..290 CDD:289560 30/92 (33%)
ANK repeat 225..256 CDD:293786 13/30 (43%)
ANK repeat 258..290 CDD:293786 7/31 (23%)
psmd10NP_001016356.1 PTZ00322 9..>95 CDD:140343 15/43 (35%)
ANK repeat 40..71 CDD:293786 5/18 (28%)
Ank_2 <54..>213 CDD:393464 47/139 (34%)
ANK repeat 73..104 CDD:293786 12/30 (40%)
ANK repeat 107..137 CDD:293786 13/29 (45%)
ANK repeat 139..170 CDD:293786 7/31 (23%)
ANK repeat 172..203 CDD:293786 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1514637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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