DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9766 and Potec

DIOPT Version :9

Sequence 1:	NP_001097672.1	Gene:	CG9766 / 40539	FlyBaseID:	FBgn0037229	Length:	340	Species:	Drosophila melanogaster
Sequence 2:	XP_017456240.1	Gene:	Potec / 364798	RGDID:	1308454	Length:	404	Species:	Rattus norvegicus

Alignment Length:	139	Identity:	41/139 - (29%)
Similarity:	66/139 - (47%)	Gaps:	2/139 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly   157 SNGFLPLANAIIQGEMCIIDLLLSAGCSVHIGDPGSGRTPLHLAFYYGHLPSARILLNKKARLEA 221
            ::...||..|:...|..|:..||....::||.| ..|.|.||.|.|.|:...|..||...|.:|.
  Rat   128 NHNITPLMKAVQSWEDEIVCFLLEHHANLHIKD-SRGNTALHYAVYGGNSAMAARLLEYGADIEE 191

  Fly   222 TDSNGMTPAHCAVDANQLEIVKFALEAGANAEARDVCGWTLLMRAVVMNASMELIKVLVTHGADL 286
            ...:.:||...|:..|:|::.:|.:...|:..|.|......||.||..:..: ::.:::..|||:
  Rat   192 RTKDNLTPLLLALKENRLKMAQFLVRMEASVHAVDSQRRNSLMYAVRCDCPV-MVNLILQQGADI 255

  Fly   287 AALDGVGKT 295
            ...|..|.|
  Rat   256 NLKDLFGWT 264

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9766	NP_001097672.1	FN3	35..98	CDD:214495
		ANK	128..244	CDD:238125	27/86 (31%)
		ANK repeat	128..156	CDD:293786
		Ank_2	129..223	CDD:289560	22/65 (34%)
		ANK repeat	158..189	CDD:293786	9/30 (30%)
		ANK repeat	192..223	CDD:293786	12/30 (40%)
		ANK	193..311	CDD:238125	31/103 (30%)
		Ank_2	197..290	CDD:289560	26/92 (28%)
		ANK repeat	225..256	CDD:293786	8/30 (27%)
		ANK repeat	258..290	CDD:293786	7/31 (23%)
Potec	XP_017456240.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1514637at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010