DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlG and Twdlalpha

DIOPT Version :10

Sequence 1:NP_649444.1 Gene:TwdlG / 40535 FlyBaseID:FBgn0037225 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster


Alignment Length:357 Identity:120/357 - (33%)
Similarity:156/357 - (43%) Gaps:83/357 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHFFIVPC-LLGLAAGIPQGYNYQA--QQQLQSSAQAGQ-----LHLPSIPQFATLAEQTILQQA 57
            |..|:..| ||.|:...||||||.:  ...|.:|..:|.     |..||....|:.......|.|
  Fly     1 MRLFVTLCSLLVLSQAKPQGYNYGSGVSGSLTTSGSSGGSSGGFLTAPSHSSVASYGPLGAFQTA 65

  Fly    58 --------LQAPKLQQVLTGGEGL--------------------ASYSNQNQASAYQ-------- 86
                    ..||.......||.|.                    |:||.....:.|.        
  Fly    66 SVGSLVGSSSAPHSVSHYGGGNGATYTTGGGNGHAATYSTGGHGATYSTGGNGATYSTGGSSNYG 130

  Fly    87 -QQATQFG--PNSAYNAL-----PQAHQPQQQH--------LVSKDIYVHVPPAEEPEDRYPQPV 135
             ...|.||  ||..:.||     |...|.|:|.        ::.|..:....| ||.|:......
  Fly   131 GSSFTGFGPTPNIGFGALAGYQAPTYQQQQEQEVQRGFQEPIIHKQFFTVAAP-EEHENLERSKH 194

  Fly   136 LPPAPPRKHYRIVFIKAPTTSVSKAALRIKQAPVEEKTIIYVLTKKPDPLDLQTAIEEIAPKQPS 200
            |....|:|:||:||||||::|.:...|..:.||.||||:||||:||.:.|::.. |...||..||
  Fly   195 LVIGRPQKNYRVVFIKAPSSSNANVKLSAEYAPKEEKTVIYVLSKKDNQLEVND-IATPAPTVPS 258

  Fly   201 KPEVFFIKYKTQEEAAHAQRTIQAQYDQLGGTSQVSDEGVAPVTSVIGVLDNQRNNGISSGQF-- 263
            |||||||||||..||:|||:.|||:||::.|||:..|.||||..||:|:||.......|||..  
  Fly   259 KPEVFFIKYKTDAEASHAQQQIQAEYDRIEGTSEHQDGGVAPAQSVVGILDGGAIGAASSGSSNY 323

  Fly   264 -------------------SGSLPNSYLPTNL 276
                               :||...||..|:|
  Fly   324 VSGGTTGSTGGTSHYVSGGTGSTGGSYTTTSL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlGNP_649444.1 DM5 113..212 CDD:214776 46/98 (47%)
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 46/100 (46%)

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