DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlF and TwdlC

DIOPT Version :9

Sequence 1:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_651519.1 Gene:TwdlC / 43245 FlyBaseID:FBgn0039469 Length:360 Species:Drosophila melanogaster


Alignment Length:379 Identity:103/379 - (27%)
Similarity:155/379 - (40%) Gaps:101/379 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVVLMCLVALTATAPQGYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIGVQP 68
            |||  |:.:|.||.              :|...|.:|.|..|:         ||..:|.|:.:. 
  Fly     7 FVV--CVASLVATT--------------LGRPEPPSPYSYHGL---------PQQQSQRALPLN- 45

  Fly    69 AIQAVQTIVAAPAPAPAPAPL-------SISLPKETFLTASPQQNLISTVQQQPQQI------VY 120
                     |.|.|.....||       :.:.|::|:|  .||.:|.:..|..|...      .|
  Fly    46 ---------AHPVPPQIYQPLPQEQSFANFAPPQQTYL--PPQMHLDAIEQVAPTAAAAEPLNAY 99

  Fly   121 QQQPQQALQTQFVQ---------RPAIVTKDIYIHSAPE--ENEELRQDEPLLENVPIRKNYRIV 174
            ......|.:...||         :...|.|.||:|..|:  |.|:..|.....:..|.:|:|:||
  Fly   100 DDSYNMAHRLSGVQHASGYNNGPQETKVHKHIYVHVPPKDFEEEDAIQTRVHHQQGPKQKHYKIV 164

  Fly   175 FIKAPSQNLKYTAAALKR----AQSSNEEKTVIYVLSKKPDLTEIQQQLQV-TQSEAKVQKPEVY 234
            ||||||      |.|:::    ....|||||:||||.|||   |.:|.:.: |....|..|||||
  Fly   165 FIKAPS------APAIRQPVVPPPPQNEEKTLIYVLHKKP---EQEQDIVIPTPPPTKPSKPEVY 220

  Fly   235 FIKYKTQEEAQRAQQEIQAQYDALGGATHISDEGVAPIASVSSGSLNLGSFVPQHSQAGQTIIHS 299
            ||||||:::.........|:.:    ....:.|..||:|.|:       ..:|            
  Fly   221 FIKYKTKKDEAPVYGPPPAEME----PRQATAEDFAPLAEVA-------DVLP------------ 262

  Fly   300 QAPTIIQPQGQPIVQLQSINQGVQGVQQQSSFVQKSTSSFAPSAPSRKYVPAKT 353
              ||.:.|..:|.|:..:|...|.|....:::..:...: ..|||:.:|:|..|
  Fly   263 --PTTLAPAPEPEVEQPAIPSAVYGPPTAAAYTGEEVQT-TLSAPANQYLPPAT 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlFNP_649443.1 DM5 137..241 CDD:214776 48/110 (44%)
TwdlCNP_651519.1 DUF243 125..227 CDD:299795 48/110 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450366
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000952
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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