DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TwdlF and TwdlG

DIOPT Version :10

Sequence 1:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_649444.1 Gene:TwdlG / 40535 FlyBaseID:FBgn0037225 Length:278 Species:Drosophila melanogaster


Alignment Length:309 Identity:123/309 - (39%)
Similarity:160/309 - (51%) Gaps:53/309 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVVLMCLVALTATAPQGYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIGVQP 68
            |.::.||:.|.|..||||.||.|            ..:.||.......:||.||.          
  Fly     3 FFIVPCLLGLAAGIPQGYNYQAQ------------QQLQSSAQAGQLHLPSIPQF---------- 45

  Fly    69 AIQAVQTIVAAPAPAPAPAPLSISLPKETFLTASPQQNLISTVQQQPQQI----VYQQQPQQALQ 129
            |..|.|||:.....||   .|...|.....|.:...||..|..|||..|.    .|...| ||.|
  Fly    46 ATLAEQTILQQALQAP---KLQQVLTGGEGLASYSNQNQASAYQQQATQFGPNSAYNALP-QAHQ 106

  Fly   130 TQFVQRPAIVTKDIYIHSAPEENEELRQDEPLLENVPIRKNYRIVFIKAPSQNLKYTAAALKRAQ 194
            .   |:..:|:||||:|..|.|..|.|..:|:|...|.||:|||||||||:.::  :.|||:..|
  Fly   107 P---QQQHLVSKDIYVHVPPAEEPEDRYPQPVLPPAPPRKHYRIVFIKAPTTSV--SKAALRIKQ 166

  Fly   195 SSNEEKTVIYVLSKKPDLTEIQQQLQVTQSEAKVQKPEVYFIKYKTQEEAQRAQQEIQAQYDALG 259
            :..||||:||||:||||..::|..::.. :..:..||||:||||||||||..||:.||||||.||
  Fly   167 APVEEKTIIYVLTKKPDPLDLQTAIEEI-APKQPSKPEVFFIKYKTQEEAAHAQRTIQAQYDQLG 230

  Fly   260 GATHISDEGVAPIASV----------------SSGSLNLGSFVPQHSQA 292
            |.:.:|||||||:.||                .||||. .|::|.:.:|
  Fly   231 GTSQVSDEGVAPVTSVIGVLDNQRNNGISSGQFSGSLP-NSYLPTNLRA 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlFNP_649443.1 DM5 137..241 CDD:214776 50/103 (49%)
TwdlGNP_649444.1 DM5 113..212 CDD:214776 50/101 (50%)

Return to query results.
Submit another query.