DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlF and TwdlE

DIOPT Version :10

Sequence 1:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_609157.3 Gene:TwdlE / 34075 FlyBaseID:FBgn0031957 Length:197 Species:Drosophila melanogaster


Alignment Length:244 Identity:72/244 - (29%)
Similarity:94/244 - (38%) Gaps:96/244 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVLMCLVALTATAPQ----GYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIG 65
            ||||.|.||.|..|:    .|...|                      :|...||.|..|      
  Fly     8 VVLMALAALVAARPEPPRDSYSAPP----------------------SSSYQPSGPSGG------ 44

  Fly    66 VQPAIQAVQTIVAAPAPAPAPAPLSISLPKETFLTASPQQNLISTVQQQPQQIVYQQQPQQALQT 130
                       ..||||...|                                     ||||   
  Fly    45 -----------YGAPAPQYGP-------------------------------------PQQA--- 58

  Fly   131 QFVQRPAIVTKDIYIHSAPEENEELRQDEPLLENVPIRKNYRIVFIKAPSQNLKYTAAALKRAQS 195
                  .::.|.:|:|..|.|.|.....:||....| :|:|:||||||||..:. ||..:.:. .
  Fly    59 ------PVIHKHVYVHVPPPEPEYQAPRKPLYVPPP-QKHYKIVFIKAPSPPVP-TAPVIPQF-P 114

  Fly   196 SNEEKTVIYVLSKKPDLTEIQQQLQV-TQSEAKVQKPEVYFIKYKTQEE 243
            .|||||::|||.|||   |.|.::.: |.:..:..|||||||:||||:|
  Fly   115 QNEEKTLVYVLVKKP---EEQPEIIIPTPAPTQPSKPEVYFIRYKTQKE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlFNP_649443.1 DM5 137..241 CDD:214776 44/104 (42%)
TwdlENP_609157.3 DM5 59..158 CDD:214776 44/104 (42%)

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