DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlF and Twdlalpha

DIOPT Version :9

Sequence 1:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster


Alignment Length:409 Identity:119/409 - (29%)
Similarity:160/409 - (39%) Gaps:120/409 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKQFVVLMCLVALTATAPQGYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIG 65
            |:.||.|..|:.|:...||||.|..       |....||...|||    |:...|..|.:..::.
  Fly     1 MRLFVTLCSLLVLSQAKPQGYNYGS-------GVSGSLTTSGSSG----GSSGGFLTAPSHSSVA 54

  Fly    66 VQPAIQAVQTIVAAPAPAPAPAPLSIS-------------------------------------- 92
            ....:.|.||.........:.||.|:|                                      
  Fly    55 SYGPLGAFQTASVGSLVGSSSAPHSVSHYGGGNGATYTTGGGNGHAATYSTGGHGATYSTGGNGA 119

  Fly    93 ---------LPKETFLTASPQQNLISTVQQQPQQIVYQQQPQQALQTQFVQRPAIVTKDIYIHSA 148
                     ....:|....|..|:........|...||||.:|.:|..| |.| |:.|..:..:|
  Fly   120 TYSTGGSSNYGGSSFTGFGPTPNIGFGALAGYQAPTYQQQQEQEVQRGF-QEP-IIHKQFFTVAA 182

  Fly   149 PEENEELRQDEPLLENVPIRKNYRIVFIKAPSQ---NLKYTAAALKRAQSSNEEKTVIYVLSKKP 210
            |||:|.|.:.:.|:...| :||||:|||||||.   |:|.:|     ..:..||||||||||||.
  Fly   183 PEEHENLERSKHLVIGRP-QKNYRVVFIKAPSSSNANVKLSA-----EYAPKEEKTVIYVLSKKD 241

  Fly   211 DLTEIQQQLQVTQSEAKVQKPEVYFIKYKTQEEAQRAQQEIQAQYDALGGATHISDEGVAPIASV 275
            :..|:..  ..|.:.....||||:||||||..||..|||:|||:||.:.|.:...|.||||..||
  Fly   242 NQLEVND--IATPAPTVPSKPEVFFIKYKTDAEASHAQQQIQAEYDRIEGTSEHQDGGVAPAQSV 304

  Fly   276 ------------SSGSLNL------------------------GSFVPQHSQAGQT--------- 295
                        ||||.|.                        ||:.......|.:         
  Fly   305 VGILDGGAIGAASSGSSNYVSGGTTGSTGGTSHYVSGGTGSTGGSYTTTSLSGGTSGGITGGVIS 369

  Fly   296 ----IIHSQAPTIIQPQGQ 310
                |.::|:.|.:.|.|:
  Fly   370 GGNIIKNAQSATYLPPNGK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlFNP_649443.1 DM5 137..241 CDD:214776 47/106 (44%)
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 48/107 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443754
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000952
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR31927
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2679
54.940

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