DRSC/TRiP Functional Genomics Resources

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Protein Alignment TwdlF and Twdlalpha

DIOPT Version :10

Sequence 1:NP_649443.1 Gene:TwdlF / 40534 FlyBaseID:FBgn0037224 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_728020.1 Gene:Twdlalpha / 326223 FlyBaseID:FBgn0052574 Length:388 Species:Drosophila melanogaster


Alignment Length:409 Identity:119/409 - (29%)
Similarity:160/409 - (39%) Gaps:120/409 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKQFVVLMCLVALTATAPQGYKYQPQLPALPIGNLRPLTPISSSGIYASGAVPSFPQAGAQPAIG 65
            |:.||.|..|:.|:...||||.|..       |....||...|||    |:...|..|.:..::.
  Fly     1 MRLFVTLCSLLVLSQAKPQGYNYGS-------GVSGSLTTSGSSG----GSSGGFLTAPSHSSVA 54

  Fly    66 VQPAIQAVQTIVAAPAPAPAPAPLSIS-------------------------------------- 92
            ....:.|.||.........:.||.|:|                                      
  Fly    55 SYGPLGAFQTASVGSLVGSSSAPHSVSHYGGGNGATYTTGGGNGHAATYSTGGHGATYSTGGNGA 119

  Fly    93 ---------LPKETFLTASPQQNLISTVQQQPQQIVYQQQPQQALQTQFVQRPAIVTKDIYIHSA 148
                     ....:|....|..|:........|...||||.:|.:|..| |.| |:.|..:..:|
  Fly   120 TYSTGGSSNYGGSSFTGFGPTPNIGFGALAGYQAPTYQQQQEQEVQRGF-QEP-IIHKQFFTVAA 182

  Fly   149 PEENEELRQDEPLLENVPIRKNYRIVFIKAPSQ---NLKYTAAALKRAQSSNEEKTVIYVLSKKP 210
            |||:|.|.:.:.|:...| :||||:|||||||.   |:|.:|     ..:..||||||||||||.
  Fly   183 PEEHENLERSKHLVIGRP-QKNYRVVFIKAPSSSNANVKLSA-----EYAPKEEKTVIYVLSKKD 241

  Fly   211 DLTEIQQQLQVTQSEAKVQKPEVYFIKYKTQEEAQRAQQEIQAQYDALGGATHISDEGVAPIASV 275
            :..|:..  ..|.:.....||||:||||||..||..|||:|||:||.:.|.:...|.||||..||
  Fly   242 NQLEVND--IATPAPTVPSKPEVFFIKYKTDAEASHAQQQIQAEYDRIEGTSEHQDGGVAPAQSV 304

  Fly   276 ------------SSGSLNL------------------------GSFVPQHSQAGQT--------- 295
                        ||||.|.                        ||:.......|.:         
  Fly   305 VGILDGGAIGAASSGSSNYVSGGTTGSTGGTSHYVSGGTGSTGGSYTTTSLSGGTSGGITGGVIS 369

  Fly   296 ----IIHSQAPTIIQPQGQ 310
                |.::|:.|.:.|.|:
  Fly   370 GGNIIKNAQSATYLPPNGK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TwdlFNP_649443.1 DM5 137..241 CDD:214776 47/106 (44%)
TwdlalphaNP_728020.1 DM5 171..270 CDD:214776 48/107 (45%)

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