DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14642 and LOC312273

DIOPT Version :9

Sequence 1:	NP_001246901.1	Gene:	CG14642 / 40532	FlyBaseID:	FBgn0037222	Length:	392	Species:	Drosophila melanogaster
Sequence 2:	NP_001101326.1	Gene:	LOC312273 / 312273	RGDID:	1563848	Length:	246	Species:	Rattus norvegicus

Alignment Length:	272	Identity:	73/272 - (26%)
Similarity:	115/272 - (42%)	Gaps:	54/272 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   129 FPNDTAVAADANDADFDGRVLARPGEYPHMAAVGFESDRGQVDYK---------CGGSLISERFV 184
            ||.:          |.|.|::.           |:......|.|:         ||||||::::|
  Rat    16 FPTE----------DNDDRIVG-----------GYTCQEHSVPYQVSLNAGSHICGGSLITDQWV 59

  Fly   185 LTAAHCTSIYEAPPKWVRIGDLDLASEKRSVEAQLLRIEQVFAHPNYKKKMYYDDIALLKLEKEV 249
            |:||||   |. |...||:|:.:: .|....| |.:...::..||:|.|....:||.|:||:...
  Rat    60 LSAAHC---YH-PQLQVRLGEHNI-YEIEGAE-QFIDAAKMILHPDYDKWTVDNDIMLIKLKSPA 118

  Fly   250 ELTEYVRPVRLWVFPELPTTIAFAMGYGATSFAKPMTNRLTNLNLTVVPNAECNAELPPLAETPS 314
            .|...|..:.|..:.....|.....|:|...|.....:.|..|:..|:.::.|:...      |.
  Rat   119 TLNSKVSTIPLPQYCPTAGTECLVSGWGVLKFGFESPSVLQCLDAPVLSDSVCHKAY------PR 177

  Fly   315 GVLESQICAQDYILNRDTCQGDSGGPLQLNLPGRRRGHRIHYHLIGITSYGVFCR-SSYPSVYTR 378
            .:..:..|.......:|:||.|||||:..|           ..:.||.|:|..|. ...|.|||:
  Rat   178 QITNNMFCLGFLEGGKDSCQYDSGGPVVCN-----------GEVQGIVSWGDGCALEGKPGVYTK 231

  Fly   379 VSSFLDWIELTV 390
            |.::|:||..|:
  Rat   232 VCNYLNWIHQTI 243

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG14642	NP_001246901.1	Tryp_SPc	146..387	CDD:238113	67/250 (27%)
CG14642	NP_001246901.1	Tryp_SPc	146..386	CDD:214473	66/249 (27%)
LOC312273	NP_001101326.1	Tryp_SPc	25..242	CDD:238113	67/250 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910