DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14642 and Ctrb1

DIOPT Version :9

Sequence 1:NP_001246901.1 Gene:CG14642 / 40532 FlyBaseID:FBgn0037222 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_036668.1 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:277 Identity:86/277 - (31%)
Similarity:126/277 - (45%) Gaps:54/277 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 VERIFPNDTAVAADANDADFDGRVLARPGEYPHMAAV----GFESDRGQVDYKCGGSLISERFVL 185
            |..|.|..|.::...|..|      |.||.:|...::    ||        :.||||||||.:|:
  Rat    21 VPTIQPVLTGLSRIVNGED------AIPGSWPWQVSLQDKTGF--------HFCGGSLISEDWVV 71

  Fly   186 TAAHC---TSIYEAPPKWVRIGDLDLASEKRSVEAQLLRIEQVFAHPNYKKKMYYDDIALLKLEK 247
            |||||   ||      ..|..|:.|..|::.::  |:|:|.|||.:|.:......:||.||||..
  Rat    72 TAAHCGVKTS------DVVVAGEFDQGSDEENI--QVLKIAQVFKNPKFNMFTVRNDITLLKLAT 128

  Fly   248 EVELTEYVRPVRLWVFPEL-----PTTIAFAMGYGATSF-AKPMTNRLTNLNLTVVPNAECNAEL 306
            ..:.:|.|..|.|   |.:     |.|:....|:|.|.: |.....:|....|.:|..|:|.   
  Rat   129 PAQFSETVSAVCL---PNVDDDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCK--- 187

  Fly   307 PPLAETPSGVLESQICAQDYILNRDTCQGDSGGPLQLNLPGRRRGHRIHYHLIGITSYGV-FCRS 370
               ....|.:.:...||.  .....:|.|||||||.....|       .:.|.||.|:|. .|.:
  Rat   188 ---KSWGSKITDVMTCAG--ASGVSSCMGDSGGPLVCQKDG-------VWTLAGIVSWGSGVCST 240

  Fly   371 SYPSVYTRVSSFLDWIE 387
            |.|:||:||::.:.|::
  Rat   241 STPAVYSRVTALMPWVQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14642NP_001246901.1 Tryp_SPc 146..387 CDD:238113 80/254 (31%)
Tryp_SPc 146..386 CDD:214473 79/253 (31%)
Ctrb1NP_036668.1 Tryp_SPc 33..256 CDD:214473 81/262 (31%)
Tryp_SPc 34..259 CDD:238113 82/264 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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