DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14642 and Tmprss4

DIOPT Version :9

Sequence 1:NP_001246901.1 Gene:CG14642 / 40532 FlyBaseID:FBgn0037222 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_663378.1 Gene:Tmprss4 / 214523 MGIID:2384877 Length:435 Species:Mus musculus


Alignment Length:250 Identity:80/250 - (32%)
Similarity:122/250 - (48%) Gaps:36/250 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 GRVLARPGEYPHMAAVGFESDRGQVDYKCGGSLISERFVLTAAHCTSIYEAPPKW-VRIGDLDLA 209
            |.|.|....:|...::.:..     .:.||||::...::||||||...|.....| ||.|...|.
Mouse   205 GGVEAPVDSWPWQVSIQYNK-----QHVCGGSILDPHWILTAAHCFRKYLDVSSWKVRAGSNILG 264

  Fly   210 SEKRSVEAQLLRIEQVF-AHPN--YKKKMYYDDIALLKLEKEVELTEYVRPVRLWVFPE--LPTT 269
            :      :..|.:.::| |.||  |.|:   .||||:||:..:..:..|||:.|....|  :|.|
Mouse   265 N------SPSLPVAKIFIAEPNPLYPKE---KDIALVKLQMPLTFSGSVRPICLPFSDEVLVPAT 320

  Fly   270 IAFAMGYGAT-SFAKPMTNRLTNLNLTVVPNAECNAELPPLAETPSG-VLESQICAQDYILNRDT 332
            ..:.:|:|.| .....|::.|...::.|:.:..||||     :...| |....:||......:||
Mouse   321 PVWVIGWGFTEENGGKMSDMLLQASVQVIDSTRCNAE-----DAYEGEVTAEMLCAGTPQGGKDT 380

  Fly   333 CQGDSGGPLQLNLPGRRRGHRIHYHLIGITSYGVFCRS-SYPSVYTRVSSFLDWI 386
            |||||||||..        |...:.::||.|:|..|.. |.|.|||:|:::|:||
Mouse   381 CQGDSGGPLMY--------HSDKWQVVGIVSWGHGCGGPSTPGVYTKVTAYLNWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14642NP_001246901.1 Tryp_SPc 146..387 CDD:238113 79/249 (32%)
Tryp_SPc 146..386 CDD:214473 78/248 (31%)
Tmprss4NP_663378.1 LDLa 56..90 CDD:238060
SRCR_2 106..195 CDD:295335
Tryp_SPc 202..427 CDD:214473 78/248 (31%)
Tryp_SPc 203..430 CDD:238113 79/249 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.