DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14642 and Gzmb

DIOPT Version :10

Sequence 1:NP_730791.1 Gene:CG14642 / 40532 FlyBaseID:FBgn0037222 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:246 Identity:74/246 - (30%)
Similarity:116/246 - (47%) Gaps:32/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ARPGEYPHMAAVGFESDRGQVDYKCGGSLISERFVLTAAHCTSIYEAPPKWVRIGDLDLASEKRS 214
            |:|...|:||.:.. .|......||||.||.|.||||||||:    .....|.:|..::..:::.
  Rat    27 AKPHSRPYMAYLQI-MDEYSGSKKCGGFLIREDFVLTAAHCS----GSKINVTLGAHNIKEQEKM 86

  Fly   215 VEAQLLRIEQVFAHPNYKKKMYYDDIALLKLEKEVELTEYVRPVRLWVFPE-----LPTTIAFAM 274
              .|::.:.::..||.|..|...:||.||||:.:.:.:..|:|:.|   |.     .|..:.:..
  Rat    87 --QQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNL---PRRNVKVKPGDVCYVA 146

  Fly   275 GYGATSFAKPMTNRLTNLNLTVVPNAECNAELPPLAETPSGVLESQICAQDYILNRDTCQGDSGG 339
            |:|........::.|..:.|||..:.:|.:.|....:.     .::|||.|..:.|.:.:|||||
  Rat   147 GWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDK-----ANEICAGDPKIKRASFRGDSGG 206

  Fly   340 PLQLNLPGRRRGHRIHYHLIGITSYGVFCRSSYPSVYTRVSSFLDWIELTV 390
            ||......           .||.|||. ...|.|..:|:||:||.||:.|:
  Rat   207 PLVCKKVA-----------AGIVSYGQ-NDGSTPRAFTKVSTFLSWIKKTM 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14642NP_730791.1 Tryp_SPc 146..387 CDD:238113 72/241 (30%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 73/243 (30%)

Return to query results.
Submit another query.