DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14642 and LOC108647852

DIOPT Version :9

Sequence 1:NP_001246901.1 Gene:CG14642 / 40532 FlyBaseID:FBgn0037222 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_017950296.2 Gene:LOC108647852 / 108647852 -ID:- Length:416 Species:Xenopus tropicalis


Alignment Length:251 Identity:77/251 - (30%)
Similarity:119/251 - (47%) Gaps:38/251 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 PGEYPHMAAVGFESDRGQVDYK------CGGSLISERFVLTAAHCTSIYEAPPKWVRI--GDLDL 208
            ||.:|.||::       |:.||      |||.|:|.|:|:|||||.|..:......||  |..||
 Frog    52 PGSWPWMASI-------QLLYKDGYGSACGGVLLSNRWVVTAAHCLSDLKRYRHLARIVLGARDL 109

  Fly   209 ASEKRSVEAQLLRIEQVFAHPNYKKKMYYDDIALLKLEKEVELTEYVRPVRLWVFPELPTTI--- 270
            .  :...|.|:..|:|...|.::..|.:.:||||::|...|:.::|::|..|   |...:.:   
 Frog   110 T--QLGPETQIRTIKQWIQHEDFDHKTHKNDIALIRLNYPVKFSDYIQPACL---PPKSSNVYKM 169

  Fly   271 --AFAMGYGATSFAKP--MTNRLTNLNLTVVPNAECNAELPPLAETPSGVLESQICAQDYILNRD 331
              ....|:|..: .||  :|..|....:.::....||:.    .....|:.:..:||.......|
 Frog   170 DDCHIAGWGLLN-EKPRTVTTMLQEATVELIDRKRCNSS----DWYNGGIHDDNLCAGYEQGGPD 229

  Fly   332 TCQGDSGGPLQLNLPGRRRGHRIHYHLIGITSYGVFCRSSYPS-VYTRVSSFLDWI 386
            .|.|||||||..    :|:...| |:::||.|:|..|...:.: |||.|..|..||
 Frog   230 VCMGDSGGPLMC----KRKKAGI-YYVVGIVSWGGLCGQPHSNGVYTSVQDFEQWI 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14642NP_001246901.1 Tryp_SPc 146..387 CDD:238113 77/251 (31%)
Tryp_SPc 146..386 CDD:214473 75/249 (30%)
LOC108647852XP_017950296.2 Tryp_SPc 44..280 CDD:238113 75/249 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.