DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment abs and AT4G33370

DIOPT Version :9

Sequence 1:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_195063.1 Gene:AT4G33370 / 829474 AraportID:AT4G33370 Length:542 Species:Arabidopsis thaliana


Alignment Length:534 Identity:315/534 - (58%)
Similarity:400/534 - (74%) Gaps:7/534 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 DQHTELKKIAEAKKLSAVEKQLREE--EKIMESIAQQKALMGVAELAKGIQYEQPIKTAWKPPRY 147
            |.:.|...:.|  :|:.:::::.||  :.:||.::.:|.||.|.|||:||.|.:|:.|.||||.:
plant     5 DGYVEYVPVEE--RLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLH 67

  Fly   148 IREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVL 212
            :|:||.::.:.:|.:..|.|.||...|||::|.:||||..:|..|..|||.:||||||||||.||
plant    68 VRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVL 132

  Fly   213 AGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYS 277
            :|||:|||||||||||||||||:|:.||::|..:|....|||..|:|||||||||||:::::.:.
plant   133 SGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFV 197

  Fly   278 KHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEA 342
            ..|...|.|.:||.|.:||:.:...|||:.:||||||||||||.|:|.||.::||.||.|.:|||
plant   198 ASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262

  Fly   343 DRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQ 407
            ||::|:|||:|:|.:|..||.||||||||||||.|||.||.||||||||:||||||||:::|.|:
plant   263 DRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQE 327

  Fly   408 VEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVD 472
            |||||||||:||||:|||||.||||||.|.|.|||.||||||||||||||||||||||:|..|:.
plant   328 VEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAIS 392

  Fly   473 AYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTE 537
            .::.|||||||||||||||||||::|||||||||.:|||||||||||||....|:|||.|||...
plant   393 LFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQS 457

  Fly   538 QSVLLDLKHLLIEGKQEVPDFLDEL-APETEHQHL-DLGDSHGCTYCGGLGHRITECPKLEAVQN 600
            :..||||||||.|.||.:|..|.|| .|..|.:.: :.....||.|||||||||.:|||.|. |.
plant   458 EITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEH-QK 521

  Fly   601 KQASNIGRRDYLSN 614
            ..|.:..|:|:..:
plant   522 SVAISSSRKDHFGS 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
absNP_524220.1 DEADc 179..393 CDD:238167 133/213 (62%)
DEXDc 192..397 CDD:214692 130/204 (64%)
Helicase_C 414..523 CDD:278689 88/108 (81%)
AT4G33370NP_195063.1 PTZ00424 72..452 CDD:185609 250/379 (66%)
DEADc 99..313 CDD:238167 133/213 (62%)
Helicase_C 334..443 CDD:278689 88/108 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 244 1.000 Domainoid score I565
eggNOG 1 0.900 - - E1_KOG0341
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9431
Inparanoid 1 1.050 669 1.000 Inparanoid score I152
OMA 1 1.010 - - QHG53695
OrthoDB 1 1.010 - - D447398at2759
OrthoFinder 1 1.000 - - FOG0005487
OrthoInspector 1 1.000 - - otm2808
orthoMCL 1 0.900 - - OOG6_103442
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3903
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.